RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 KCNG4Q8TDN1 519 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 SLC5A5Q92911 643 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 GBP4Q96PP9 640 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 NAP1L4Q99733 375 aaKnown RBP14.85□□□□□ -0.03
CHD3-210ENST00000479080 GOLPH3LQ9H4A5 285 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 AGO4Q9HCK5 861 aaKnown RBP14.85□□□□□ -0.03
CHD3-210ENST00000479080 PDGFCQ9NRA1 345 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 KCNH7Q9NS40 1196 aa14.85□□□□□ -0.03
CHD3-210ENST00000479080 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
CHD3-210ENST00000479080 SRPRBQ9Y5M8 271 aaKnown RBP14.85□□□□□ -0.03
CHD3-210ENST00000479080 HTTP42858 3142 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 LOC102724159A0A0B4J2E5 919 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 PP2D1A8MPX8 630 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 SPATA31C2B4DYI2 1134 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 FKTNO75072 461 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 PRPF40AO75400 957 aaKnown RBP14.84□□□□□ -0.03
CHD3-210ENST00000479080 CAPN15O75808 1086 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
CHD3-210ENST00000479080 PSMD10O75832 226 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 BMP15O95972 392 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 KCNA2P16389 499 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 ICAM3P32942 547 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 ZNF76P36508 570 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 RGS2P41220 211 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 SP2Q02086 613 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 PDE4DQ08499 809 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 PWP2Q15269 919 aaKnown RBP14.84□□□□□ -0.03
CHD3-210ENST00000479080 STXBP2Q15833 593 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 TAPT1Q6NXT6 567 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 EEPD1Q7L9B9 569 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 TRIB2Q92519 343 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 GPRASP2Q96D09 838 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 TINF2Q9BSI4 451 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 CSRNP2Q9H175 543 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 CEP131Q9UPN4 1083 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 MCM3APO60318 1980 aa14.84□□□□□ -0.03
CHD3-210ENST00000479080 POTEFA5A3E0 1075 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 VWA3AA6NCI4 1184 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 ASB14A6NK59 587 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 TBX3O15119 743 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 ADCY6O43306 1168 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 STAM2O75886 525 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 TXKP42681 527 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 SETQ01105 290 aaPredicted RBP14.83□□□□□ -0.04
CHD3-210ENST00000479080 TRIM32Q13049 653 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 MTMR1Q13613 665 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 NFKBIBQ15653 356 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 ARL6IP4Q66PJ3 421 aaKnown RBP14.83□□□□□ -0.04
CHD3-210ENST00000479080 OLFML2BQ68BL8 750 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 KRI1Q8N9T8 703 aaKnown RBP14.83□□□□□ -0.04
CHD3-210ENST00000479080 TRPV1Q8NER1 839 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 LRRC15Q8TF66 581 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 MMTAG2Q9BU76 263 aaKnown RBP14.83□□□□□ -0.04
CHD3-210ENST00000479080 PKD2L1Q9P0L9 805 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 SRRDQ9UH36 339 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 SYNGAP1Q96PV0 1343 aa14.83□□□□□ -0.04
CHD3-210ENST00000479080 A0A087X0B3 334 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 RBM47A0AV96 593 aaKnown RBP14.82□□□□□ -0.04
CHD3-210ENST00000479080 POTEMA6NI47 508 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 EML1O00423 815 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 LAD1O00515 517 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 CUTAO60888 179 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 ZNF865P0CJ78 1059 aaPredicted RBP14.82□□□□□ -0.04
CHD3-210ENST00000479080 HSPA8P11142 646 aaKnown RBP14.82□□□□□ -0.04
CHD3-210ENST00000479080 CYP2C19P33261 490 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 ME1P48163 572 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHD3-210ENST00000479080 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 CCDC62Q6P9F0 684 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 SEPT14Q6ZU15 432 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 IGSF22Q8N9C0 903 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 GPT2Q8TD30 523 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 FAM20AQ96MK3 541 aa14.82□□□□□ -0.04
CHD3-210ENST00000479080 FAM237AA0A1B0GTK4 181 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.81□□□□□ -0.04
CHD3-210ENST00000479080 IPO5O00410 1097 aaKnown RBP14.81□□□□□ -0.04
CHD3-210ENST00000479080 FOXN1O15353 648 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 CCNE2O96020 404 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
CHD3-210ENST00000479080 LIG1P18858 919 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 UBA1P22314 1058 aaKnown RBP14.81□□□□□ -0.04
CHD3-210ENST00000479080 CDC25AP30304 524 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 RESP18Q5W5W9 173 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 ADALQ6DHV7 355 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 MSL3Q8N5Y2 521 aaKnown RBP14.81□□□□□ -0.04
CHD3-210ENST00000479080 COPS5Q92905 334 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 FERMT2Q96AC1 680 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 ERO1AQ96HE7 468 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 EPSTI1Q96J88 318 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 ZNF577Q9BSK1 485 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 UNC45AQ9H3U1 944 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 VTA1Q9NP79 307 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 HPSEQ9Y251 543 aa14.81□□□□□ -0.04
CHD3-210ENST00000479080 A0A1W2PQ27 194 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 A0A1W2PQ64 194 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 A0A1W2PQD8 194 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 SORBS3O60504 671 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 ELNP15502 786 aa14.8□□□□□ -0.04
CHD3-210ENST00000479080 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms