RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PTGS1P23219 599 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 ZNF76P36508 570 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 ARHGAP1Q07960 439 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 NEDD9Q14511 834 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 CCDC83Q8IWF9 413 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 EMID1Q96A84 441 aaPredicted RBP23.39■■□□□ 1.33
VARS-224ENST00000479051 AIFM3Q96NN9 605 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 ALG1Q9BT22 464 aa23.39■■□□□ 1.33
VARS-224ENST00000479051 SPATA31C2B4DYI2 1134 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 UBA1P22314 1058 aaKnown RBP23.38■■□□□ 1.33
VARS-224ENST00000479051 ARHGAP4P98171 946 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 MTMR1Q13613 665 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 LRRC26Q2I0M4 334 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 C1orf53Q5VUE5 145 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 MLXIPQ9HAP2 919 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 UBIAD1Q9Y5Z9 338 aa23.38■■□□□ 1.33
VARS-224ENST00000479051 MKI67P46013 3256 aaKnown RBP23.37■■□□□ 1.33
VARS-224ENST00000479051 A6NJR5 290 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 MAFGO15525 162 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 GGPS1O95749 300 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 MYL3P08590 195 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 RTP1P59025 263 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 TRIM29Q14134 588 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 SNX17Q15036 470 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 CELF3Q5SZQ8 465 aaKnown RBP23.37■■□□□ 1.33
VARS-224ENST00000479051 CXCL17Q6UXB2 119 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 C7orf61Q8IZ16 206 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 BLIDQ8IZY5 108 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 DAGLBQ8NCG7 672 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 GIMAP8Q8ND71 665 aaPredicted RBP23.37■■□□□ 1.33
VARS-224ENST00000479051 AFG1LQ8WV93 481 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 JADE2Q9NQC1 790 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 PDE4DIPQ5VU43 2346 aa23.37■■□□□ 1.33
VARS-224ENST00000479051 A0A0U1RQG5 324 aaPredicted RBP23.36■■□□□ 1.33
VARS-224ENST00000479051 JAK2O60674 1132 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 HMGN5P82970 282 aaKnown RBP23.36■■□□□ 1.33
VARS-224ENST00000479051 CEP55Q53EZ4 464 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 PPTC7Q8NI37 304 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 RASGRP4Q8TDF6 673 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 SENP7Q9BQF6 1050 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 MXRA8Q9BRK3 442 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 MTG1Q9BT17 334 aaPredicted RBP23.36■■□□□ 1.33
VARS-224ENST00000479051 SEZ6LQ9BYH1 1024 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 BRMS1Q9HCU9 246 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 ATP11BQ9Y2G3 1177 aa23.36■■□□□ 1.33
VARS-224ENST00000479051 TNRC18O15417 2968 aaPredicted RBP23.36■■□□□ 1.33
VARS-224ENST00000479051 MROH7Q68CQ1 1323 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 MMP3P08254 477 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 FDPSP14324 419 aaKnown RBP23.35■■□□□ 1.33
VARS-224ENST00000479051 ITGB5P18084 799 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 ST3GAL1Q11201 340 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 DGKDQ16760 1214 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 MYSM1Q5VVJ2 828 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 METTL7BQ6UX53 244 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 SPATA33Q96N06 139 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 PHF20Q9BVI0 1012 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 KCNJ14Q9UNX9 436 aa23.35■■□□□ 1.33
VARS-224ENST00000479051 NOP56O00567 594 aaKnown RBP23.34■■□□□ 1.33
VARS-224ENST00000479051 CYP3A4P08684 503 aa23.34■■□□□ 1.33
VARS-224ENST00000479051 PURAQ00577 322 aaKnown RBP23.34■■□□□ 1.33
VARS-224ENST00000479051 SP2Q02086 613 aa23.34■■□□□ 1.33
VARS-224ENST00000479051 SEMA3FQ13275 785 aa23.34■■□□□ 1.33
VARS-224ENST00000479051 KRT25Q7Z3Z0 450 aa23.34■■□□□ 1.33
VARS-224ENST00000479051 TRIM60Q495X7 471 aa23.33■■□□□ 1.33
VARS-224ENST00000479051 NIPA1Q7RTP0 329 aa23.33■■□□□ 1.33
VARS-224ENST00000479051 FAM184AQ8NB25 1140 aa23.33■■□□□ 1.33
VARS-224ENST00000479051 PRKAG2Q9UGJ0 569 aa23.33■■□□□ 1.33
VARS-224ENST00000479051 ALPK3Q96L96 1907 aa23.32■■□□□ 1.32
VARS-224ENST00000479051 CCDC194A0A1B0GVG4 234 aa23.32■■□□□ 1.32
VARS-224ENST00000479051 ARVCFO00192 962 aa23.32■■□□□ 1.32
VARS-224ENST00000479051 SORBS3O60504 671 aa23.32■■□□□ 1.32
VARS-224ENST00000479051 DTNBO60941 627 aa23.32■■□□□ 1.32
VARS-224ENST00000479051 PRPF38BQ5VTL8 546 aaKnown RBP23.32■■□□□ 1.32
VARS-224ENST00000479051 CYFIP1Q7L576 1253 aa23.32■■□□□ 1.32
VARS-224ENST00000479051 DCDC2CA8MYV0 355 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 MEIS1O00470 390 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 ADAMTS3O15072 1205 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 PQBP1O60828 265 aaKnown RBP23.31■■□□□ 1.32
VARS-224ENST00000479051 PPFIA4O75335 1185 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 KRT2P35908 639 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 USP11P51784 963 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 SETQ01105 290 aaPredicted RBP23.31■■□□□ 1.32
VARS-224ENST00000479051 ITGA7Q13683 1181 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 NONOQ15233 471 aaKnown RBP eCLIP23.31■■□□□ 1.32
VARS-224ENST00000479051 NPY5RQ15761 445 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 PLA2G4DQ86XP0 818 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 CRYGNQ8WXF5 182 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 TMX3Q96JJ7 454 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 TOX2Q96NM4 488 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 SDF4Q9BRK5 362 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 KATNAL1Q9BW62 490 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 KCNH7Q9NS40 1196 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 KIF3AQ9Y496 699 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 MYH7BA7E2Y1 1941 aa23.31■■□□□ 1.32
VARS-224ENST00000479051 M0R2N6 131 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 TLR3O15455 904 aaKnown RBP23.3■■□□□ 1.32
VARS-224ENST00000479051 KCNA2P16389 499 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 CIITAP33076 1130 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 TLE2Q04725 743 aa23.3■■□□□ 1.32
VARS-224ENST00000479051 HSDL1Q3SXM5 330 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms