RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 PLA2G4DQ86XP0 818 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 MLXIPQ9HAP2 919 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 TCEAL9Q9UHQ7 104 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 Q9Y3F1 56 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 UBIAD1Q9Y5Z9 338 aa12.95□□□□□ -0.34
SRRT-211ENST00000478693 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 MYADML2A6NDP7 307 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 BTBD18B2RXH4 712 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 M0R2N6 131 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 NOP56O00567 594 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 ITGB5P18084 799 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 GJA9P57773 515 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 BEX3Q00994 111 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 SP4Q02446 784 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 BECN1Q14457 450 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 NEDD9Q14511 834 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 GNASQ5JWF2 1037 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 NEK8Q86SG6 692 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 PCSK9Q8NBP7 692 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 FBXO18Q8NFZ0 1043 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 DIS3LQ8TF46 1054 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 NAP1L4Q99733 375 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 UPF3AQ9H1J1 476 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
SRRT-211ENST00000478693 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 MCM3APO60318 1980 aa12.94□□□□□ -0.34
SRRT-211ENST00000478693 CCNT1O60563 726 aaKnown RBP12.93□□□□□ -0.34
SRRT-211ENST00000478693 MYL3P08590 195 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 CYP3A4P08684 503 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 TGFB3P10600 412 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 PDCP20941 246 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 ICAM3P32942 547 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 PRR16Q569H4 304 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 NECAB2Q7Z6G3 386 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
SRRT-211ENST00000478693 VTI1AQ96AJ9 217 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
SRRT-211ENST00000478693 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 SDF4Q9BRK5 362 aa12.93□□□□□ -0.34
SRRT-211ENST00000478693 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 MAFGO15525 162 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 MARCH6O60337 910 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 TDP2O95551 362 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 ASGR1P07306 291 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 ATP2B1P20020 1258 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 CST5P28325 142 aaPredicted RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 USP11P51784 963 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 ARHGAP1Q07960 439 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 KCNA10Q16322 511 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 CELF3Q5SZQ8 465 aaKnown RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 CYFIP1Q7L576 1253 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 AFG1LQ8WV93 481 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 FERMT2Q96AC1 680 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 UIMC1Q96RL1 719 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 ZNF577Q9BSK1 485 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 SENP6Q9GZR1 1112 aaPredicted RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 FOXP1Q9H334 677 aaPredicted RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
SRRT-211ENST00000478693 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 NOL7Q9UMY1 257 aaKnown RBP12.92□□□□□ -0.34
SRRT-211ENST00000478693 MMP3P08254 477 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 ARP10275 920 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 GCFC2P16383 781 aaKnown RBP12.91□□□□□ -0.34
SRRT-211ENST00000478693 CIITAP33076 1130 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 ACLYP53396 1101 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 SP2Q02086 613 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 EARS2Q5JPH6 523 aaKnown RBP12.91□□□□□ -0.34
SRRT-211ENST00000478693 METTL7BQ6UX53 244 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 NOSTRINQ8IVI9 506 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 KLHDC9Q8NEP7 349 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 TNFRSF25Q93038 417 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 SENP7Q9BQF6 1050 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
SRRT-211ENST00000478693 HTATIP2Q9BUP3 242 aa12.91□□□□□ -0.34
SRRT-211ENST00000478693 AGO4Q9HCK5 861 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms