RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ARHGAP4P98171 946 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 TRIM29Q14134 588 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 TMEM63BQ5T3F8 832 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 C1orf53Q5VUE5 145 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 KRT40Q6A162 431 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 CCSAPQ6IQ19 270 aaPredicted RBP30.56■■■□□ 2.48
CCM2-211ENST00000478582 ZFP91Q96JP5 570 aaPredicted RBP30.56■■■□□ 2.48
CCM2-211ENST00000478582 RTEL1Q9NZ71 1219 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 DDX41Q9UJV9 622 aaKnown RBP30.56■■■□□ 2.48
CCM2-211ENST00000478582 KIAA1217Q5T5P2 1943 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 ARIH2O95376 493 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 MMP1P03956 469 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 CST5P28325 142 aaPredicted RBP30.55■■■□□ 2.48
CCM2-211ENST00000478582 NLRX1Q86UT6 975 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 C8orf76Q96K31 380 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 ATP11BQ9Y2G3 1177 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 KIF3AQ9Y496 699 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 MRVI1Q9Y6F6 885 aa30.55■■■□□ 2.48
CCM2-211ENST00000478582 MOXD2PA6NHM9 499 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 SPATA31C2B4DYI2 1134 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 C6orf222P0C671 652 aaPredicted RBP30.54■■■□□ 2.48
CCM2-211ENST00000478582 BMP8BP34820 402 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 ACLYP53396 1101 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 KCNA10Q16322 511 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 GPRASP2Q96D09 838 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 BRMS1Q9HCU9 246 aa30.54■■■□□ 2.48
CCM2-211ENST00000478582 A0A1W2PQ45 241 aaPredicted RBP30.53■■■□□ 2.48
CCM2-211ENST00000478582 A0A1W2PQY0 241 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 MYADML2A6NDP7 307 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 MAFGO15525 162 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 FIBPO43427 364 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 ITGB5P18084 799 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 KRT2P35908 639 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 KRT25Q7Z3Z0 450 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 TLK2Q86UE8 772 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 PCSK9Q8NBP7 692 aaKnown RBP30.53■■■□□ 2.48
CCM2-211ENST00000478582 FBXO18Q8NFZ0 1043 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 MXRA8Q9BRK3 442 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 JADE2Q9NQC1 790 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 SMC3Q9UQE7 1217 aa30.53■■■□□ 2.48
CCM2-211ENST00000478582 A0A1W2PPC1 479 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 MAGEA10P43363 369 aaPredicted RBP30.52■■■□□ 2.48
CCM2-211ENST00000478582 USP11P51784 963 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 IRX5P78411 483 aaPredicted RBP30.52■■■□□ 2.48
CCM2-211ENST00000478582 LY6KQ17RY6 165 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 TRIM60Q495X7 471 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 OXER1Q8TDS5 423 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 INTS4Q96HW7 963 aaKnown RBP30.52■■■□□ 2.48
CCM2-211ENST00000478582 CDHR1Q96JP9 859 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 AP5M1Q9H0R1 490 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 PCDH10Q9P2E7 1040 aa30.52■■■□□ 2.48
CCM2-211ENST00000478582 CTAGE5O15320 804 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 DYNC1LI2O43237 492 aaPredicted RBP30.51■■■□□ 2.47
CCM2-211ENST00000478582 GJB2P29033 226 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 CIITAP33076 1130 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 FXR1P51114 621 aaKnown RBP eCLIP30.51■■■□□ 2.47
CCM2-211ENST00000478582 SEMA3FQ13275 785 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 CEP55Q53EZ4 464 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 GNASQ5JWF2 1037 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 NIPA1Q7RTP0 329 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 TNFRSF25Q93038 417 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 DNAH12Q6ZR08 3092 aa30.51■■■□□ 2.47
CCM2-211ENST00000478582 TRIOBPQ9H2D6 2365 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 NONOQ15233 471 aaKnown RBP eCLIP30.5■■■□□ 2.47
CCM2-211ENST00000478582 HSCBQ8IWL3 235 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 TBCKQ8TEA7 893 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 COPS5Q92905 334 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 SENP7Q9BQF6 1050 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 STARD7Q9NQZ5 370 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 PRKAG2Q9UGJ0 569 aa30.5■■■□□ 2.47
CCM2-211ENST00000478582 MEIS1O00470 390 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 EDIL3O43854 480 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 GH1P01241 217 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 ASGR1P07306 291 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 PTGS1P23219 599 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 FOSBP53539 338 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 SP2Q02086 613 aa30.49■■■□□ 2.47
CCM2-211ENST00000478582 DIS3L2Q8IYB7 885 aaKnown RBP30.49■■■□□ 2.47
CCM2-211ENST00000478582 EMID1Q96A84 441 aaPredicted RBP30.49■■■□□ 2.47
CCM2-211ENST00000478582 CCDC194A0A1B0GVG4 234 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 BTBD18B2RXH4 712 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 ZNF76P36508 570 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 ARHGAP1Q07960 439 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 NR5A1Q13285 461 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 MTMR1Q13613 665 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 SAFBQ15424 915 aaKnown RBP eCLIP30.48■■■□□ 2.47
CCM2-211ENST00000478582 OR6J1Q8NGC5 347 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 CYP2W1Q8TAV3 490 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 GLT1D1Q96MS3 346 aa30.48■■■□□ 2.47
CCM2-211ENST00000478582 ELP1O95163 1332 aa30.47■■■□□ 2.47
CCM2-211ENST00000478582 FAM86B1E9PN63 330 aa30.47■■■□□ 2.47
CCM2-211ENST00000478582 FAM86B2P0C5J1 330 aa30.47■■■□□ 2.47
CCM2-211ENST00000478582 UBA1P22314 1058 aaKnown RBP30.47■■■□□ 2.47
CCM2-211ENST00000478582 GUCY1B3Q02153 619 aa30.47■■■□□ 2.47
CCM2-211ENST00000478582 TLE2Q04725 743 aa30.47■■■□□ 2.47
CCM2-211ENST00000478582 NEDD9Q14511 834 aa30.47■■■□□ 2.47
CCM2-211ENST00000478582 FSCN1Q16658 493 aaKnown RBP30.47■■■□□ 2.47
CCM2-211ENST00000478582 IGLV3-22A0A075B6J6 115 aa30.46■■■□□ 2.47
CCM2-211ENST00000478582 A6NJR5 290 aa30.46■■■□□ 2.47
CCM2-211ENST00000478582 BEX3Q00994 111 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms