RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PPIL6Q8IXY8 311 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 TTLL6Q8N841 843 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 ZSWIM3Q96MP5 696 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 HIRIP3Q9BW71 556 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 TMPRSS5Q9H3S3 457 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 FBXL7Q9UJT9 491 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 ZNF536O15090 1300 aa6.16□□□□□ -1.42
CDC42BPA-212ENST00000478573 MROH6A6NGR9 719 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 SUSD5O60279 629 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 GTF2F1P35269 517 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 GTF2A2P52657 109 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 NKX3-2P78367 333 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 KIAA2012Q0VF49 1180 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 SF1Q15637 639 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 SOGA3Q5TF21 947 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 BORAQ6PGQ7 559 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 RIOX2Q8IUF8 465 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 LGI4Q8N135 537 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 INVSQ9Y283 1065 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 PCDHA2Q9Y5H9 948 aa6.15□□□□□ -1.42
CDC42BPA-212ENST00000478573 PLATP00750 562 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 ADAM17P78536 824 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 TBC1D10BQ4KMP7 808 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 TNNI3KQ59H18 835 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 FAM26FQ5R3K3 315 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 TXNDC5Q8NBS9 432 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 CLDND1Q9NY35 253 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 MYRFQ9Y2G1 1151 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 X6R8D5 127 aa6.14□□□□□ -1.43
CDC42BPA-212ENST00000478573 ARNTLO00327 626 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 STK10O94804 968 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 CYP1A1P04798 512 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 LCP1P13796 627 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 CHRNA2Q15822 529 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 CR1LQ2VPA4 569 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 NBPF6Q5VWK0 638 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 RCBTB1Q8NDN9 531 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 LCORQ96JN0 433 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 NBPF4Q96M43 638 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 C8orf49Q96NF6 230 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 RBM15Q96T37 977 aaKnown RBP eCLIP6.13□□□□□ -1.431e-7■□□□□ 8.3
CDC42BPA-212ENST00000478573 DNAJC2Q99543 621 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 NGRNQ9NPE2 291 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 SHROOM4Q9ULL8 1493 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 RB1CC1Q8TDY2 1594 aa6.13□□□□□ -1.43
CDC42BPA-212ENST00000478573 HGSO14964 777 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 CPP00450 1065 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 LTBRP36941 435 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 ADAM9Q13443 819 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 STEAP3Q658P3 488 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 DPH6Q7L8W6 267 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 Q8N1Y9 231 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 TMEM145Q8NBT3 493 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 ARRDC4Q8NCT1 418 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 KREMEN2Q8NCW0 462 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 CHST13Q8NET6 341 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 TOE1Q96GM8 510 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 CROTQ9UKG9 612 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 UNC13AQ9UPW8 1703 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 ZNF652Q9Y2D9 606 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 PCDHB4Q9Y5E5 795 aa6.12□□□□□ -1.43
CDC42BPA-212ENST00000478573 NACADO15069 1562 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 SCG5P05408 212 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 GFRA1P56159 465 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 LSAMPQ13449 338 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 FXNQ16595 210 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 ACBD5Q5T8D3 534 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 MRM1Q6IN84 353 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 GLB1LQ6UWU2 654 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 MICAL1Q8TDZ2 1067 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 CCDC140Q96MF4 163 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 ZNF408Q9H9D4 720 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 L2HGDHQ9H9P8 463 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 DTLQ9NZJ0 730 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 PRKAG3Q9UGI9 489 aa6.11□□□□□ -1.43
CDC42BPA-212ENST00000478573 H7BY64 318 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 DGKIO75912 1065 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 ETFBP38117 255 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 PRR31Q5SQ13 230 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 LIMS2Q7Z4I7 341 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 CKAP2LQ8IYA6 745 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 SAMD11Q96NU1 681 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 CLIC6Q96NY7 704 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 ST6GALNAC2Q9UJ37 374 aa6.1□□□□□ -1.43
CDC42BPA-212ENST00000478573 MYO15BQ96JP2 1530 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 TCRBV5S2A0A599 114 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 AGRPO00253 132 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 GJB6O95452 261 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 ZNF20P17024 532 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 ZNF28P17035 718 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 CPZQ66K79 652 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 DENND5AQ6IQ26 1287 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 TMC5Q6UXY8 1006 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 EEPD1Q7L9B9 569 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 EPB41L1Q9H4G0 881 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 MYOTQ9UBF9 498 aa6.09□□□□□ -1.43
CDC42BPA-212ENST00000478573 KLF4O43474 513 aa6.08□□□□□ -1.44
CDC42BPA-212ENST00000478573 GRIA2P42262 883 aa6.08□□□□□ -1.44
CDC42BPA-212ENST00000478573 SERINC3Q13530 473 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms