RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 UBA1P22314 1058 aaKnown RBP7.88□□□□□ -1.15
BRCA1-215ENST00000478531 ACLYP53396 1101 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 VTI1AQ96AJ9 217 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 HTATIP2Q9BUP3 242 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
BRCA1-215ENST00000478531 CTAGE5O15320 804 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 ZEB2O60315 1214 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 STAM2O75886 525 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 GGPS1O95749 300 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 GH1P01241 217 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 MYL3P08590 195 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 CST5P28325 142 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-215ENST00000478531 ZNF76P36508 570 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 SREBF1P36956 1147 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 CPT1AP50416 773 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 CHMP4BP1P59074 171 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 ARHGAP4P98171 946 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 SP4Q02446 784 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 ARHGAP1Q07960 439 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 MTMR1Q13613 665 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 TRIM29Q14134 588 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 LRRC26Q2I0M4 334 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 BRDTQ58F21 947 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-215ENST00000478531 XRRA1Q6P2D8 792 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 CCDC62Q6P9F0 684 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 CXCL17Q6UXB2 119 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 NLRX1Q86UT6 975 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 DHX37Q8IY37 1157 aaKnown RBP7.87□□□□□ -1.15
BRCA1-215ENST00000478531 BLIDQ8IZY5 108 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
BRCA1-215ENST00000478531 KLHDC9Q8NEP7 349 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 AFG1LQ8WV93 481 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 TMX3Q96JJ7 454 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 INPP4AQ96PE3 977 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-215ENST00000478531 PHF20Q9BVI0 1012 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 DDX41Q9UJV9 622 aaKnown RBP7.87□□□□□ -1.15
BRCA1-215ENST00000478531 PHF24Q9UPV7 400 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 Q9Y3F1 56 aa7.87□□□□□ -1.15
BRCA1-215ENST00000478531 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 FIBPO43427 364 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 EVI5O60447 810 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 ITGB5P18084 799 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 SP2Q02086 613 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 GUCY1B3Q02153 619 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 SEMA3FQ13275 785 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 NPY5RQ15761 445 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 KCNV1Q6PIU1 500 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 CYFIP1Q7L576 1253 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 TEX2Q8IWB9 1127 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 C7orf61Q8IZ16 206 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 FAM184AQ8NB25 1140 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 CYP2W1Q8TAV3 490 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 GLT1D1Q96MS3 346 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 TSEN34Q9BSV6 310 aaKnown RBP7.86□□□□□ -1.15
BRCA1-215ENST00000478531 BCAS3Q9H6U6 928 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 MLXIPQ9HAP2 919 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 STARD7Q9NQZ5 370 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 PCDH10Q9P2E7 1040 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 ATP11BQ9Y2G3 1177 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 MMP3P08254 477 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 ZNF286BP0CG31 522 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 MCM2P49736 904 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 PSMC6P62333 389 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 HMGN5P82970 282 aaKnown RBP7.86□□□□□ -1.15
BRCA1-215ENST00000478531 CEP55Q53EZ4 464 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 MCTP2Q6DN12 878 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 CCSAPQ6IQ19 270 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-215ENST00000478531 DAGLBQ8NCG7 672 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 OXER1Q8TDS5 423 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 GPRASP2Q96D09 838 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 SPATA33Q96N06 139 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 LLPHQ9BRT6 129 aaKnown RBP7.86□□□□□ -1.15
BRCA1-215ENST00000478531 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 UBIAD1Q9Y5Z9 338 aa7.86□□□□□ -1.15
BRCA1-215ENST00000478531 WDR81Q562E7 1941 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 KAT6AQ92794 2004 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 MYH9P35579 1960 aaKnown RBP7.85□□□□□ -1.15
BRCA1-215ENST00000478531 TRIP12Q14669 1992 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-215ENST00000478531 CCDC194A0A1B0GVG4 234 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 FAM86B1E9PN63 330 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
BRCA1-215ENST00000478531 PQBP1O60828 265 aaKnown RBP7.85□□□□□ -1.15
BRCA1-215ENST00000478531 FAM86B2P0C5J1 330 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 TGFB3P10600 412 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 ICAM3P32942 547 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 KRT2P35908 639 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 RTP1P59025 263 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 LAMC2Q13753 1193 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 NEDD9Q14511 834 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 INF2Q27J81 1249 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 HSDL1Q3SXM5 330 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 TRIM60Q495X7 471 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 CELF3Q5SZQ8 465 aaKnown RBP7.85□□□□□ -1.15
BRCA1-215ENST00000478531 MYSM1Q5VVJ2 828 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 KRT40Q6A162 431 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 GALNT17Q6IS24 598 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 SLC39A5Q6ZMH5 540 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms