RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 ZSCAN20P17040 1043 aaPredicted RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 COPB1P53618 953 aaKnown RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 MRPS25P82663 173 aaKnown RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 DMTNQ08495 405 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 GRM4Q14833 912 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 PPP2R5AQ15172 486 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 TRMT1LQ7Z2T5 733 aaKnown RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 CABP7Q86V35 215 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 RELL1Q8IUW5 271 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 SLF2Q8IX21 1173 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 IFT122Q9HBG6 1241 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 USP40Q9NVE5 1235 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 BARHL2Q9NY43 387 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 TSKSQ9UJT2 592 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 LEMD3Q9Y2U8 911 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 DAGLAQ9Y4D2 1042 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 GRXCR2A6NFK2 248 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 CAND2O75155 1236 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 RHOXF2BP0C7M4 288 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 ERVK-24P63145 666 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 RC3H1Q5TC82 1133 aaKnown RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 ZNF771Q7L3S4 317 aaPredicted RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 MAATS1Q7Z4T9 603 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 CERS5Q8N5B7 392 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 ZNF397Q8NF99 534 aaPredicted RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 RRP36Q96EU6 259 aaKnown RBP6.73□□□□□ -1.33
SH3D19-207ENST00000478503 RHOXF2Q9BQY4 288 aa6.73□□□□□ -1.33
SH3D19-207ENST00000478503 ANKRD36CQ5JPF3 1778 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 SLC37A4O43826 429 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 STX10O60499 249 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 DNA2P51530 1060 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 SNX16P57768 344 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 GSTO1P78417 241 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 CYP27A1Q02318 531 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 IKQ13123 557 aaPredicted RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 PPP1R18Q6NYC8 613 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 GDAP1L1Q96MZ0 367 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 ZC3H12CQ9C0D7 883 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 TCP11L1Q9NUJ3 509 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 HDAC6Q9UBN7 1215 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L15C9J2P7 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L13C9JLJ4 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L11C9JVI0 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L18D6R9N7 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L22D6RA61 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L17D6RBQ6 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L19D6RCP7 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L20D6RJB6 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 MFAP3LO75121 409 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 RNASEH2AO75792 299 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 RCAN1P53805 252 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L24Q0WX57 530 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 TCP11X2Q5H9J9 407 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L6PQ6QN14 398 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 FAM47EQ6ZV65 393 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 IRF2BP1Q8IU81 584 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 CSGALNACT2Q8N6G5 542 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 CCDC155Q8N6L0 562 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 CAPZA3Q96KX2 299 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 PSMB7Q99436 277 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 EIF2AK1Q9BQI3 630 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 MUC3BQ9H195 1237 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 CCSER2Q9H7U1 834 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 AGPAT5Q9NUQ2 364 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 ADGRG1Q9Y653 693 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 DUOX1Q9NRD9 1551 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 LRP5O75197 1615 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 TTC26A0AVF1 554 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 PALM3A6NDB9 673 aaPredicted RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 SRGAP2O75044 1071 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 HSPA1LP34931 641 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 GEMIN4P57678 1058 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 NONOQ15233 471 aaKnown RBP eCLIP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 SPICE1Q8N0Z3 855 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 SLC35F6Q8N357 371 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 RBM17Q96I25 401 aaKnown RBP6.72□□□□□ -1.33
SH3D19-207ENST00000478503 IER2Q9BTL4 223 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 SUGCTQ9HAC7 445 aa6.72□□□□□ -1.33
SH3D19-207ENST00000478503 USP17L10C9JJH3 530 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.33
SH3D19-207ENST00000478503 KIF1CO43896 1103 aaKnown RBP6.71□□□□□ -1.33
SH3D19-207ENST00000478503 GDF11O95390 407 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 BMP15O95972 392 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 RBP3P10745 1247 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 MTIF2P46199 727 aaKnown RBP6.71□□□□□ -1.33
SH3D19-207ENST00000478503 UTP14CQ5TAP6 766 aaKnown RBP6.71□□□□□ -1.33
SH3D19-207ENST00000478503 ZNF658Q5TYW1 1059 aaPredicted RBP6.71□□□□□ -1.33
SH3D19-207ENST00000478503 SENP7Q9BQF6 1050 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 L2HGDHQ9H9P8 463 aa6.71□□□□□ -1.33
SH3D19-207ENST00000478503 FAM207AQ9NSI2 230 aaPredicted RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms