RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 TMC6Q7Z403 805 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 LZTR1Q8N653 840 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 COPS5Q92905 334 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 MRGPRX3Q96LB0 322 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 MMP19Q99542 508 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 NKX2-4Q9H2Z4 354 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 GCM1Q9NP62 436 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 DBR1Q9UK59 544 aaKnown RBP8.08□□□□□ -1.12
ITGA4-209ENST00000478440 NUDT5Q9UKK9 219 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 CEP162Q5TB80 1403 aa8.08□□□□□ -1.12
ITGA4-209ENST00000478440 VWDEQ8N2E2 1590 aa8.07□□□□□ -1.12
ITGA4-209ENST00000478440 DBHP09172 617 aa8.07□□□□□ -1.12
ITGA4-209ENST00000478440 HOXC12P31275 282 aa8.07□□□□□ -1.12
ITGA4-209ENST00000478440 SCRN1Q12765 414 aa8.07□□□□□ -1.12
ITGA4-209ENST00000478440 TARBP2Q15633 366 aaKnown RBP8.07□□□□□ -1.12
ITGA4-209ENST00000478440 STRCP1A6NGW2 1772 aa8.07□□□□□ -1.12
ITGA4-209ENST00000478440 NCOA2Q15596 1464 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 MBD5Q9P267 1494 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 MIA2Q96PC5 1412 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 CPP00450 1065 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 MSL3P1P0C860 447 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 PFKLP17858 780 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 PLEKHN1Q494U1 663 aaPredicted RBP8.06□□□□□ -1.12
ITGA4-209ENST00000478440 E4F1Q66K89 784 aaPredicted RBP8.06□□□□□ -1.12
ITGA4-209ENST00000478440 ANKS3Q6ZW76 656 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 AMIGO3Q86WK7 504 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 USP33Q8TEY7 942 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 MZB1Q8WU39 189 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 SGPP1Q9BX95 441 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 CNTD2Q9H8S5 307 aa8.06□□□□□ -1.12
ITGA4-209ENST00000478440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.06□□□□□ -1.12
ITGA4-209ENST00000478440 EIF2AK4Q9P2K8 1649 aaKnown RBP8.06□□□□□ -1.12
ITGA4-209ENST00000478440 ARHGEF5Q12774 1597 aa8.05□□□□□ -1.12
ITGA4-209ENST00000478440 ZNF227Q86WZ6 799 aa8.05□□□□□ -1.12
ITGA4-209ENST00000478440 NETO2Q8NC67 525 aa8.05□□□□□ -1.12
ITGA4-209ENST00000478440 PEX11GQ96HA9 241 aa8.05□□□□□ -1.12
ITGA4-209ENST00000478440 KCTD3Q9Y597 815 aa8.05□□□□□ -1.12
ITGA4-209ENST00000478440 UBR1Q8IWV7 1749 aa8.05□□□□□ -1.12
ITGA4-209ENST00000478440 IQCA1LA6NCM1 817 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 B2RBV5 119 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 F8W031 263 aaPredicted RBP8.04□□□□□ -1.12
ITGA4-209ENST00000478440 STK10O94804 968 aaKnown RBP8.04□□□□□ -1.12
ITGA4-209ENST00000478440 GJB6O95452 261 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 ITGAVP06756 1048 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 ZSCAN22P10073 491 aaPredicted RBP8.04□□□□□ -1.12
ITGA4-209ENST00000478440 PLS3P13797 630 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 TACR1P25103 407 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 DDR2Q16832 855 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 FBLN7Q53RD9 439 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 NAALADL2Q58DX5 795 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 LDHDQ86WU2 507 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 CPNE8Q86YQ8 564 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 CKAP2LQ8IYA6 745 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 CLEC1BQ9P126 229 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 EID1Q9Y6B2 187 aa8.04□□□□□ -1.12
ITGA4-209ENST00000478440 ABCC3O15438 1527 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 MED14O60244 1454 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 ERVK-7P63135 1459 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 ZBTB7AO95365 584 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 THBDP07204 575 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 SNRPB2P08579 225 aaKnown RBP8.03□□□□□ -1.12
ITGA4-209ENST00000478440 GLI4P10075 376 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 CDR1P51861 262 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 GTF2A2P52657 109 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 KCNAB2Q13303 367 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 SLC9A5Q14940 896 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 TCERG1LQ5VWI1 586 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 C1QL4Q86Z23 238 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 BTN2A2Q8WVV5 523 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
ITGA4-209ENST00000478440 C8orf37Q96NL8 207 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 LRRC7Q96NW7 1537 aa8.03□□□□□ -1.12
ITGA4-209ENST00000478440 SCAF11Q99590 1463 aaKnown RBP8.02□□□□□ -1.13
ITGA4-209ENST00000478440 XIRP1Q702N8 1843 aaKnown RBP8.02□□□□□ -1.13
ITGA4-209ENST00000478440 C7orf72A4D263 438 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 IRS4O14654 1257 aaPredicted RBP8.02□□□□□ -1.13
ITGA4-209ENST00000478440 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
ITGA4-209ENST00000478440 MYO1BO43795 1136 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 SCG5P05408 212 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 NLGN1Q8N2Q7 840 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 RNF38Q9H0F5 515 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 IRF2BPLQ9H1B7 796 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 RWDD3Q9Y3V2 267 aa8.02□□□□□ -1.13
ITGA4-209ENST00000478440 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 KANK1Q14678 1352 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 MEFVO15553 781 aaPredicted RBP8.01□□□□□ -1.13
ITGA4-209ENST00000478440 KLF4O43474 513 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 ATP2B1P20020 1258 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 EPHB3P54753 998 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 ACBD5Q5T8D3 534 aaPredicted RBP8.01□□□□□ -1.13
ITGA4-209ENST00000478440 MRM1Q6IN84 353 aaKnown RBP8.01□□□□□ -1.13
ITGA4-209ENST00000478440 MICAL1Q8TDZ2 1067 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 TSPAN17Q96FV3 270 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 SGSM3Q96HU1 749 aa8.01□□□□□ -1.13
ITGA4-209ENST00000478440 GULP1Q9UBP9 304 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms