RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 B4E1Z4 1266 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 OPA1O60313 960 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 FARP2O94887 1054 aaPredicted RBP5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 ASLP04424 464 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 COL6A2P12110 1019 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 IGFALSP35858 605 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 EMC4Q5J8M3 183 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 C16orf59Q7L2K0 433 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 OTOP3Q7RTS5 596 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 MILR1Q7Z6M3 343 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 NIM1KQ8IY84 436 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 PIP4K2CQ8TBX8 421 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 ALG3Q92685 438 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 MCOLN1Q9GZU1 580 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 KCNK12Q9HB15 430 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 SLC6A20Q9NP91 592 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 CATSPERZQ9NTU4 200 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 INTS7Q9NVH2 962 aaKnown RBP5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 PALD1Q9ULE6 856 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 NUB1Q9Y5A7 615 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 HCFC2Q9Y5Z7 792 aa5.7□□□□□ -1.5
SMARCA1-204ENST00000478420 SEMA7AO75326 666 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 DNAJC8O75937 253 aaPredicted RBP5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 PYGMP11217 842 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 SDSP20132 328 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 DNM2P50570 870 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 ZNF200P98182 395 aaPredicted RBP5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 DALRD3Q5D0E6 543 aaKnown RBP5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 CYP4F22Q6NT55 531 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 KCNN1Q92952 543 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 FAM84AQ96KN4 292 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 SMOC1Q9H4F8 434 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 ZNF652Q9Y2D9 606 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 PCDHB4Q9Y5E5 795 aa5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 TNPO3Q9Y5L0 923 aaKnown RBP5.69□□□□□ -1.5
SMARCA1-204ENST00000478420 CCDC66A2RUB6 948 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 IRS4O14654 1257 aaPredicted RBP5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 TADA3O75528 432 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 NPTXRO95502 500 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 FLT3P36888 993 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 GYS2P54840 703 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 MESP2Q0VG99 397 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 CRY1Q16526 586 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 OGFOD2Q6N063 350 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 SYDE1Q6ZW31 735 aaPredicted RBP5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 DDX53Q86TM3 631 aaKnown RBP5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 LDHDQ86WU2 507 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 DHX37Q8IY37 1157 aaKnown RBP5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 PHOSPHO1Q8TCT1 267 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 MFSD3Q96ES6 412 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 SLC38A3Q99624 504 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 CELF4Q9BZC1 486 aaKnown RBP5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 CNTD2Q9H8S5 307 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 MYOTQ9UBF9 498 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 MBD1Q9UIS9 605 aaPredicted RBP5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 DSEQ9UL01 958 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 COQ6Q9Y2Z9 468 aa5.68□□□□□ -1.5
SMARCA1-204ENST00000478420 CADPSQ9ULU8 1353 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 NKRFO15226 690 aaKnown RBP eCLIP5.67□□□□□ -1.56e-8■■■□□ 16.7
SMARCA1-204ENST00000478420 CKMP06732 381 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 TMEM253P0C7T8 217 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 PDE6AP16499 860 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 ZNF460Q14592 562 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 TARBP2Q15633 366 aaKnown RBP5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 GPR19Q15760 415 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 HABP4Q5JVS0 413 aaKnown RBP5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 EGFLAMQ63HQ2 1017 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 ZCCHC8Q6NZY4 707 aaKnown RBP5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 ARHGAP36Q6ZRI8 547 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 EP400NLQ6ZTU2 488 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 LRRTM3Q86VH5 581 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 AMIGO3Q86WK7 504 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 IGSF22Q8N9C0 903 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 UHMK1Q8TAS1 419 aaKnown RBP5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 FMNL2Q96PY5 1086 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 PPP1R16BQ96T49 567 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 YIPF4Q9BSR8 244 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 SGPP1Q9BX95 441 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 BCAS3Q9H6U6 928 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 CBLCQ9ULV8 474 aa5.67□□□□□ -1.5
SMARCA1-204ENST00000478420 TCRBV5S2A0A599 114 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 SLC27A2O14975 620 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 N4BP3O15049 544 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 JMJD7P0C870 316 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 NCAM1P13591 858 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 KCNA6P17658 529 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 PFKLP17858 780 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 KRT15P19012 456 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 PMLP29590 882 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 DLG4P78352 724 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 LACTBP83111 547 aaPredicted RBP5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 CNNM4Q6P4Q7 775 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 OSTM1Q86WC4 334 aa5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 CISD2Q8N5K1 135 aaKnown RBP5.66□□□□□ -1.5
SMARCA1-204ENST00000478420 POU5F2Q8N7G0 328 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms