RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 INSL6Q9Y581 213 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 EMSYQ7Z589 1322 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 PI4K2BG5E9Z4 385 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
CCM2-210ENST00000478169 LGR5O75473 907 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 CFBP00751 764 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 PARP1P09874 1014 aaKnown RBP11.25□□□□□ -0.61
CCM2-210ENST00000478169 SDSP20132 328 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 KCNA4P22459 653 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 HSD17B4P51659 736 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 TCTN1Q2MV58 587 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 RILPL2Q969X0 211 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 AMNQ9BXJ7 453 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 JMJD4Q9H9V9 463 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 MYO7AQ13402 2215 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
CCM2-210ENST00000478169 AMHP03971 560 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 ZNF286BP0CG31 522 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 TGFB3P10600 412 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 LEXMQ3ZCV2 418 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 CELF3Q5SZQ8 465 aaKnown RBP11.24□□□□□ -0.61
CCM2-210ENST00000478169 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 ENAHQ8N8S7 591 aaPredicted RBP11.24□□□□□ -0.61
CCM2-210ENST00000478169 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
CCM2-210ENST00000478169 VAT1LQ9HCJ6 419 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 ZSWIM5Q9P217 1185 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 CTNNA3Q9UI47 895 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 MTUS1Q9ULD2 1270 aa11.24□□□□□ -0.61
CCM2-210ENST00000478169 RALGAPA2Q2PPJ7 1873 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 PIEZO1Q92508 2521 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 RSPH10B2B2RC85 870 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 B4E1Z4 1266 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 OPLAHO14841 1288 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 RGS20O76081 388 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 RSPH10BP0C881 870 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
CCM2-210ENST00000478169 HTRA4P83105 476 aaPredicted RBP11.23□□□□□ -0.61
CCM2-210ENST00000478169 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
CCM2-210ENST00000478169 TRAF1Q13077 416 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
CCM2-210ENST00000478169 IMMTQ16891 758 aaKnown RBP11.23□□□□□ -0.61
CCM2-210ENST00000478169 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
CCM2-210ENST00000478169 HSDL1Q3SXM5 330 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 FAM117BQ6P1L5 589 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 VSIG10LQ86VR7 867 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 DBF4BQ8NFT6 615 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCM2-210ENST00000478169 WNT8BQ93098 351 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 MTMR8Q96EF0 704 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 SPATA33Q96N06 139 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 SAMD11Q96NU1 681 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 KRT23Q9C075 422 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 C11orf16Q9NQ32 467 aa11.23□□□□□ -0.61
CCM2-210ENST00000478169 HIP1O00291 1037 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 ZBTB5O15062 677 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 CAND2O75155 1236 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 GGPS1O95749 300 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 MYCLP12524 364 aaPredicted RBP11.22□□□□□ -0.61
CCM2-210ENST00000478169 HOXC8P31273 242 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 THPOP40225 353 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 AAMPQ13685 434 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 PGM5Q15124 567 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 PTPROQ16827 1216 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 PLEKHG4Q58EX7 1191 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 CWC27Q6UX04 472 aaKnown RBP11.22□□□□□ -0.61
CCM2-210ENST00000478169 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCM2-210ENST00000478169 MYOCDQ8IZQ8 938 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 GJD3Q8N144 294 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.22□□□□□ -0.61
CCM2-210ENST00000478169 SP7Q8TDD2 431 aaPredicted RBP11.22□□□□□ -0.61
CCM2-210ENST00000478169 MRPL38Q96DV4 380 aaKnown RBP11.22□□□□□ -0.61
CCM2-210ENST00000478169 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 C16orf70Q9BSU1 422 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 DOCK5Q9H7D0 1870 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 DIAPH3Q9NSV4 1193 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 PCDHA1Q9Y5I3 950 aa11.22□□□□□ -0.61
CCM2-210ENST00000478169 C17orf102A2RUQ5 167 aa11.21□□□□□ -0.61
CCM2-210ENST00000478169 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
CCM2-210ENST00000478169 H3BRB1 525 aa11.21□□□□□ -0.61
CCM2-210ENST00000478169 KCNA5P22460 613 aa11.21□□□□□ -0.61
CCM2-210ENST00000478169 SP2Q02086 613 aa11.21□□□□□ -0.61
CCM2-210ENST00000478169 HIC1Q14526 733 aa11.21□□□□□ -0.61
CCM2-210ENST00000478169 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms