RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 OXR1Q8N573 874 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 NKAIN3Q8N8D7 197 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 PDZD8Q8NEN9 1154 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 FBXO41Q8TF61 875 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 GIMAP1Q8WWP7 306 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 FCRL2Q96LA5 508 aaPredicted RBP4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 CDADC1Q9BWV3 514 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 SLC12A9Q9BXP2 914 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 C22orf23Q9BZE7 217 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 EPN3Q9H201 632 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 ST7Q9NRC1 585 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 APEX2Q9UBZ4 518 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 ZMYM5Q9UJ78 669 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 AKT3Q9Y243 479 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 FANCIQ9NVI1 1328 aa4.18□□□□□ -1.74
FNDC3B-209ENST00000478016 FITM1A5D6W6 292 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 TRIM64CA6NLI5 447 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 PRRT4C9JH25 899 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 HPXP02790 462 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 CD3EP07766 207 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 GSTM1P09488 218 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 SRGNP10124 158 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 TAL1P17542 331 aaPredicted RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 AMPD2Q01433 879 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 TAF11Q15544 211 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 SV2CQ496J9 727 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 FAM133BQ5BKY9 247 aaKnown RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 RTP2Q5QGT7 225 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 ACBD5Q5T8D3 534 aaPredicted RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 MCTP1Q6DN14 999 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 TTLL5Q6EMB2 1281 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 LCA5Q86VQ0 697 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 SPPL2CQ8IUH8 684 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 IFNL3Q8IZI9 196 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 CHCHD4Q8N4Q1 142 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 NGEFQ8N5V2 710 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 ANKS4BQ8N8V4 417 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 PRPF38AQ8NAV1 312 aaKnown RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 BVESQ8NE79 360 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 PMFBP1Q8TBY8 1022 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 LINC01599Q8WXQ3 324 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 PPP1R14AQ96A00 147 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 MAP6Q96JE9 813 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 MPHOSPH6Q99547 160 aaKnown RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 G6PC3Q9BUM1 346 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 CCDC94Q9BW85 323 aaPredicted RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 PDCL3Q9H2J4 239 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 TSPY26PQ9H489 355 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 SUDS3Q9H7L9 328 aaPredicted RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 AS3MTQ9HBK9 375 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 CHST12Q9NRB3 414 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 TMCC3Q9ULS5 477 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 MAFFQ9ULX9 164 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 EMC9Q9Y3B6 208 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 PPP2R3BQ9Y5P8 575 aa4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 RSF1Q96T23 1441 aaPredicted RBP4.17□□□□□ -1.74
FNDC3B-209ENST00000478016 URB2Q14146 1524 aaKnown RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 GOLGA6L6A8MZA4 724 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 AGRPO00253 132 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 CTAGE5O15320 804 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 HTATSF1O43719 755 aaKnown RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 ORC4O43929 436 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 TPPPO94811 219 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 PAPLNO95428 1278 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 MYL1P05976 194 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 RRM1P23921 792 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 HOXC13P31276 330 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 KIR2DL1P43626 348 aaPredicted RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 KIR2DL2P43627 348 aaPredicted RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 KIAA2012Q0VF49 1180 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 NR0B2Q15466 257 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 NFE2Q16621 373 aaPredicted RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 SLC10A6Q3KNW5 377 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 SYCP2LQ5T4T6 812 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 CCDC70Q6NSX1 233 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 CYP2R1Q6VVX0 501 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 ZPBP2Q6X784 338 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 HSCBQ8IWL3 235 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 BRSK2Q8IWQ3 736 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 FAM43AQ8N2R8 423 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 ARL6IP6Q8N6S5 226 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 PAF1Q8N7H5 531 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 ACRBPQ8NEB7 543 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 ST13P5Q8NFI4 369 aaPredicted RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 MYLIPQ8WY64 445 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 PAWRQ96IZ0 340 aaKnown RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 KIRREL1Q96J84 757 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 HHIPL1Q96JK4 782 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 RNPC3Q96LT9 517 aaKnown RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 FCRL3Q96P31 734 aaPredicted RBP4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 FAM167BQ9BTA0 163 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 AP5S1Q9NUS5 200 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 ERVK13-1Q9NX77 482 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 HOXC10Q9NYD6 342 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 SIRPGQ9P1W8 387 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 LRP2BPQ9P2M1 347 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 TNFRSF10DQ9UBN6 386 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 CFTRP13569 1480 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 WASHC2CQ9Y4E1 1318 aa4.16□□□□□ -1.74
FNDC3B-209ENST00000478016 KLHL33A6NCF5 533 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms