RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SERINC5Q86VE9 423 aa23.72■■□□□ 1.39
PDLIM1-202ENST00000477757 TBC1D5Q92609 795 aa23.72■■□□□ 1.39
PDLIM1-202ENST00000477757 NSUN3Q9H649 340 aaKnown RBP23.72■■□□□ 1.39
PDLIM1-202ENST00000477757 ZMYM6O95789 1325 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 GPM6BQ13491 265 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 HIC1Q14526 733 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 CDC37Q16543 378 aaPredicted RBP23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 HFE2Q6ZVN8 426 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 FBXO11Q86XK2 927 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 MIER1Q8N108 512 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 YME1L1Q96TA2 773 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 MRVI1Q9Y6F6 885 aa23.71■■□□□ 1.39
PDLIM1-202ENST00000477757 RALGAPA2Q2PPJ7 1873 aa23.7■■□□□ 1.39
PDLIM1-202ENST00000477757 NLRC5Q86WI3 1866 aa23.7■■□□□ 1.39
PDLIM1-202ENST00000477757 RSPH10B2B2RC85 870 aa23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 EIF3JO75822 258 aaKnown RBP23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 RSPH10BP0C881 870 aa23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 GOLGA8HP0CJ92 632 aa23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 MX1P20591 662 aa23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 DHX37Q8IY37 1157 aaKnown RBP23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 CPVLQ9H3G5 476 aa23.7■■□□□ 1.38
PDLIM1-202ENST00000477757 FGAP02671 866 aa23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 IRS1P35568 1242 aa23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 THPOP40225 353 aa23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 MCF2L2Q86YR7 1114 aa23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 TMEM192Q8IY95 271 aa23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 SNX27Q96L92 541 aa23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 UPF3BQ9BZI7 483 aaKnown RBP23.69■■□□□ 1.38
PDLIM1-202ENST00000477757 PCP11498 1178 aaKnown RBP23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 EIF2AK2P19525 551 aaKnown RBP23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 ARHGEF16Q5VV41 709 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 EP400NLQ6ZTU2 488 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 TOP1MTQ969P6 601 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 UBA5Q9GZZ9 404 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 HELLSQ9NRZ9 838 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 CLDND1Q9NY35 253 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 RCAN3Q9UKA8 241 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 ATG2AQ2TAZ0 1938 aa23.68■■□□□ 1.38
PDLIM1-202ENST00000477757 NCK2O43639 380 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 PPFIA4O75335 1185 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 NR3C2P08235 984 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 HOXC8P31273 242 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 RPAINQ86UA6 219 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 SEPT8Q92599 483 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 MFSD14AQ96MC6 490 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 POP1Q99575 1024 aaKnown RBP23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 PXMP2Q9NR77 195 aa23.67■■□□□ 1.38
PDLIM1-202ENST00000477757 SALL3Q9BXA9 1300 aa23.66■■□□□ 1.38
PDLIM1-202ENST00000477757 LTBRP36941 435 aa23.66■■□□□ 1.38
PDLIM1-202ENST00000477757 SMAD2Q15796 467 aaKnown RBP23.66■■□□□ 1.38
PDLIM1-202ENST00000477757 CTC1Q2NKJ3 1217 aa23.66■■□□□ 1.38
PDLIM1-202ENST00000477757 HERC4Q5GLZ8 1057 aaPredicted RBP23.66■■□□□ 1.38
PDLIM1-202ENST00000477757 ANKS1AQ92625 1134 aa23.66■■□□□ 1.38
PDLIM1-202ENST00000477757 USP34Q70CQ2 3546 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 CAND2O75155 1236 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 HAND2P61296 217 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 HSDL1Q3SXM5 330 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 MYSM1Q5VVJ2 828 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 TBC1D10CQ8IV04 446 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 ADGRF4Q8IZF3 695 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 SPATA33Q96N06 139 aa23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 MRPL11Q9Y3B7 192 aaKnown RBP23.65■■□□□ 1.38
PDLIM1-202ENST00000477757 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 RGS20O76081 388 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 UPP2O95045 317 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 QRICH1Q2TAL8 776 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 CELF3Q5SZQ8 465 aaKnown RBP23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 MFSD6Q6ZSS7 791 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 EVI5LQ96CN4 794 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 C16orf70Q9BSU1 422 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 IFIH1Q9BYX4 1025 aaKnown RBP23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 MUTYHQ9UIF7 546 aa23.64■■□□□ 1.37
PDLIM1-202ENST00000477757 MYH7BA7E2Y1 1941 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 A0A0D9SFI3 127 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 C17orf102A2RUQ5 167 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 C5orf67F2Z3F1 127 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 HSPD1P10809 573 aaKnown RBP23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 GHRHRQ02643 423 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 KCNV1Q6PIU1 500 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 DGKHQ86XP1 1220 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 PNMA1Q8ND90 353 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 ATP6V0A1Q93050 837 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 FAM227BQ96M60 508 aa23.63■■□□□ 1.37
PDLIM1-202ENST00000477757 TECTAO75443 2155 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 NEDD4P46934 1319 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 MYO7AQ13402 2215 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 GGPS1O95749 300 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 CTNNB1P35222 781 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 HSD17B4P51659 736 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 ASPRV1Q53RT3 343 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 PDCD2LQ9BRP1 358 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 C11orf84Q9BUA3 381 aaPredicted RBP23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 OSBPL7Q9BZF2 842 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 LMAN2LQ9H0V9 348 aa23.62■■□□□ 1.37
PDLIM1-202ENST00000477757 MYH6P13533 1939 aa23.61■■□□□ 1.37
PDLIM1-202ENST00000477757 OPLAHO14841 1288 aa23.61■■□□□ 1.37
PDLIM1-202ENST00000477757 MBTPS2O43462 519 aa23.61■■□□□ 1.37
PDLIM1-202ENST00000477757 CFBP00751 764 aa23.61■■□□□ 1.37
PDLIM1-202ENST00000477757 CTSHP09668 335 aa23.61■■□□□ 1.37
PDLIM1-202ENST00000477757 SMIM10L2AP0DMW4 78 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms