RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	ZNF281	Q9Y2X9	895 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	NHS	Q6T4R5	1651 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	IL16	Q14005	1332 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KDM6A	O15550	1401 aa	Predicted RBP	5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	DOT1L	Q8TEK3	1739 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289		A0A087WZG4	1122 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289		E9PSI1	815 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SLC39A6	Q13433	755 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SNAP47	Q5SQN1	464 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	LILRA2	Q8N149	483 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	CAMKK2	Q96RR4	588 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	THUMPD2	Q9BTF0	503 aa	Known RBP	5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	G6PC3	Q9BUM1	346 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	STK31	Q9BXU1	1019 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	VTI1B	Q9UEU0	232 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	CEMIP	Q8WUJ3	1361 aa		5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SOS1	Q07889	1333 aa	Predicted RBP	5.74	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	HEG1	Q9ULI3	1381 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	FITM1	A5D6W6	292 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	NOTO	A8MTQ0	251 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	CHL1	O00533	1208 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	UBOX5	O94941	541 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	HOXB7	P09629	217 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	DLG4	P78352	724 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PWP1	Q13610	501 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	NFIX	Q14938	502 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	ERMP1	Q7Z2K6	904 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PHACTR4	Q8IZ21	702 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	OXR1	Q8N573	874 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	LINC01599	Q8WXQ3	324 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	DHX38	Q92620	1227 aa	Known RBP	5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SHISA4	Q96DD7	197 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	MCOLN1	Q9GZU1	580 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	COPRS	Q9NQ92	184 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KCNQ5	Q9NR82	932 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KBTBD4	Q9NVX7	518 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	MIS18A	Q9NYP9	233 aa		5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	YBX2	Q9Y2T7	364 aa	Known RBP	5.73	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SCN11A	Q9UI33	1791 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	MYOCOS	A0A1B0GUC4	107 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SLC22A31	A6NKX4	558 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	RGS13	O14921	159 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	NPHP1	O15259	732 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	TLR3	O15455	904 aa	Known RBP	5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	EFEMP2	O95967	443 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	EIF2S2	P20042	333 aa	Known RBP	5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	RFC4	P35249	363 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KRTAP10-2	P60368	255 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	EIF4A1	P60842	406 aa	Known RBP	5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SLC15A2	Q16348	729 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	CCDC30	Q5VVM6	783 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	FBXL19	Q6PCT2	694 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	IRF2BP1	Q8IU81	584 aa		5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	INTS4	Q96HW7	963 aa	Known RBP	5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	ZNF496	Q96IT1	587 aa	Predicted RBP	5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	YTHDC1	Q96MU7	727 aa	Known RBP	5.72	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	BTAF1	O14981	1849 aa		5.71	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SBF2	Q86WG5	1849 aa		5.71	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	MRC1	P22897	1456 aa		5.71	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SHANK3	Q9BYB0	1731 aa		5.71	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PSPN	O60542	156 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	RPS6KA4	O75676	772 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DDX58	O95786	925 aa	Known RBP	5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CT47B1	P0C2W7	299 aa	Predicted RBP	5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CANX	P27824	592 aa	Known RBP	5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	POLD1	P28340	1107 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CRKL	P46109	303 aa	Known RBP	5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GALK1	P51570	392 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ARSH	Q5FYA8	562 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	KIF6	Q6ZMV9	814 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	PTF1A	Q7RTS3	328 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GGN	Q86UU5	652 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DNAJC10	Q8IXB1	793 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF428	Q96B54	188 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	HDAC8	Q9BY41	377 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	LRRC3	Q9BY71	257 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SLC6A17	Q9H1V8	727 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CWC22	Q9HCG8	908 aa	Known RBP	5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	DBF4	Q9UBU7	674 aa	Predicted RBP	5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF652	Q9Y2D9	606 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ADAMTS20	P59510	1910 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ITGB4	P16144	1822 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZBED9	Q6R2W3	1325 aa		5.71	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ELL2	O00472	640 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GREM1	O60565	184 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TRIM13	O60858	407 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	GBP1	P32455	592 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	IL6ST	P40189	918 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CRK	P46108	304 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CHRNE	Q04844	493 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	NMI	Q13287	307 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	R3HDM1	Q15032	1099 aa	Known RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	CLEC16A	Q2KHT3	1053 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TWISTNB	Q3B726	338 aa	Predicted RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	TCERG1L	Q5VWI1	586 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ZNF605	Q86T29	641 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SPPL2C	Q8IUH8	684 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ANKS4B	Q8N8V4	417 aa		5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	ENOX1	Q8TC92	643 aa	Known RBP	5.7	□□□□□ -1.5
NSMCE4A-208	ENST00000477289	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms