RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LMF1Q96S06 567 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 KLHL25Q9H0H3 589 aa4.87□□□□□ -1.63
XRN1-211ENST00000477237 CGGBP1Q9UFW8 167 aaPredicted RBP4.87□□□□□ -1.63
XRN1-211ENST00000477237 PLS3P13797 630 aa4.86□□□□□ -1.63
XRN1-211ENST00000477237 FPR2P25090 351 aa4.86□□□□□ -1.63
XRN1-211ENST00000477237 IL12RB1P42701 662 aa4.86□□□□□ -1.63
XRN1-211ENST00000477237 FBXO33Q7Z6M2 555 aa4.86□□□□□ -1.63
XRN1-211ENST00000477237 GIMAP8Q8ND71 665 aaPredicted RBP4.86□□□□□ -1.63
XRN1-211ENST00000477237 TOE1Q96GM8 510 aaKnown RBP4.86□□□□□ -1.63
XRN1-211ENST00000477237 MMP19Q99542 508 aa4.86□□□□□ -1.63
XRN1-211ENST00000477237 GGT7Q9UJ14 662 aa4.86□□□□□ -1.63
XRN1-211ENST00000477237 IMPDH2P12268 514 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 COMTP21964 271 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 GUCY2CP25092 1073 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 INF2Q27J81 1249 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 TEPPQ6URK8 271 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 PCSK4Q6UW60 755 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 Q6ZSN1 163 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
XRN1-211ENST00000477237 TAX1BP1Q86VP1 789 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 ARHGEF39Q8N4T4 335 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 ARRDC4Q8NCT1 418 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 LARP4BQ92615 738 aaKnown RBP4.85□□□□□ -1.63
XRN1-211ENST00000477237 FGD4Q96M96 766 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 GPRC5CQ9NQ84 441 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 DTLQ9NZJ0 730 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 SLC4A7Q9Y6M7 1214 aa4.85□□□□□ -1.63
XRN1-211ENST00000477237 KLHL18O94889 574 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 RBM10P98175 930 aaKnown RBP4.84□□□□□ -1.63
XRN1-211ENST00000477237 GRB10Q13322 594 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 MROH9Q5TGP6 573 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 FNDC7Q5VTL7 733 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 HEATR6Q6AI08 1181 aaKnown RBP4.84□□□□□ -1.63
XRN1-211ENST00000477237 ADAT2Q7Z6V5 191 aaKnown RBP4.84□□□□□ -1.63
XRN1-211ENST00000477237 RIOX2Q8IUF8 465 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 C1orf210Q8IVY1 113 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 FUKQ8N0W3 1084 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 CACTINQ8WUQ7 758 aaKnown RBP4.84□□□□□ -1.63
XRN1-211ENST00000477237 WRNIP1Q96S55 665 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 TMEM209Q96SK2 561 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 GBP3Q9H0R5 595 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 DMRT1Q9Y5R6 373 aa4.84□□□□□ -1.63
XRN1-211ENST00000477237 U2SURPO15042 1029 aaKnown RBP4.83□□□□□ -1.64
XRN1-211ENST00000477237 PPM1BO75688 479 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 LRG1P02750 347 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 EPHX1P07099 455 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 ACO1P21399 889 aaKnown RBP4.83□□□□□ -1.64
XRN1-211ENST00000477237 CSRP2Q16527 193 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 TMC5Q6UXY8 1006 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 Q6ZUG5 572 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 COPS5Q92905 334 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 PLEKHG4BQ96PX9 1271 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 FERD3LQ96RJ6 166 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 MMRN2Q9H8L6 949 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 RBPJLQ9UBG7 517 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 TMEFF2Q9UIK5 374 aaPredicted RBP4.83□□□□□ -1.64
XRN1-211ENST00000477237 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
XRN1-211ENST00000477237 TCRBV5S2A0A599 114 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 ADH4P08319 380 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 GNPTABQ3T906 1256 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 PHF19Q5T6S3 580 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 ZNF627Q7L945 461 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 HS2ST1Q7LGA3 356 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 GPR155Q7Z3F1 870 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 MRGPRGQ86SM5 289 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 RBBP8NLQ8NC74 664 aaPredicted RBP4.82□□□□□ -1.64
XRN1-211ENST00000477237 RCC1LQ96I51 464 aaKnown RBP4.82□□□□□ -1.64
XRN1-211ENST00000477237 X6R8D5 127 aa4.82□□□□□ -1.64
XRN1-211ENST00000477237 CSF2RBP32927 897 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 SCRN1Q12765 414 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 FBXW10Q5XX13 1052 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 CEP68Q76N32 757 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 NLRP10Q86W26 655 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 Q8N1Y9 231 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 NEIL1Q96FI4 390 aaPredicted RBP4.81□□□□□ -1.64
XRN1-211ENST00000477237 PCDHB10Q9UN67 800 aa4.81□□□□□ -1.64
XRN1-211ENST00000477237 TUBA3CQ13748 450 aa4.8□□□□□ -1.64
XRN1-211ENST00000477237 TUBA3EQ6PEY2 450 aa4.8□□□□□ -1.64
XRN1-211ENST00000477237 KIAA0825Q8IV33 1275 aa4.8□□□□□ -1.64
XRN1-211ENST00000477237 ZNF513Q8N8E2 541 aaPredicted RBP4.8□□□□□ -1.64
XRN1-211ENST00000477237 TRMT2BQ96GJ1 504 aaKnown RBP4.8□□□□□ -1.64
XRN1-211ENST00000477237 AJUBAQ96IF1 538 aa4.8□□□□□ -1.64
XRN1-211ENST00000477237 SPON2Q9BUD6 331 aa4.8□□□□□ -1.64
XRN1-211ENST00000477237 HGSO14964 777 aaPredicted RBP4.79□□□□□ -1.64
XRN1-211ENST00000477237 RAD17O75943 681 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 BCL6P41182 706 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 RPL11P62913 178 aaKnown RBP4.79□□□□□ -1.64
XRN1-211ENST00000477237 DNAJC14Q6Y2X3 702 aaPredicted RBP4.79□□□□□ -1.64
XRN1-211ENST00000477237 PROSER1Q86XN7 944 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 PPT2Q9UMR5 302 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 PTPN22Q9Y2R2 807 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 SUGT1Q9Y2Z0 365 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 PCDHB4Q9Y5E5 795 aa4.79□□□□□ -1.64
XRN1-211ENST00000477237 TIMM13Q9Y5L4 95 aaPredicted RBP4.79□□□□□ -1.64
XRN1-211ENST00000477237 TADA3O75528 432 aa4.78□□□□□ -1.64
XRN1-211ENST00000477237 KCNH1O95259 989 aa4.78□□□□□ -1.64
XRN1-211ENST00000477237 COL10A1Q03692 680 aa4.78□□□□□ -1.64
XRN1-211ENST00000477237 MAMDC4Q6UXC1 1216 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms