RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-214ENST00000477152 PGK1P00558 417 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 IL2RAP01589 272 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 ZNF865P0CJ78 1059 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-214ENST00000477152 CST5P28325 142 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-214ENST00000477152 ACVR2BQ13705 512 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 SLFN13Q68D06 897 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 ANKRD33Q7Z3H0 272 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 TICAM2Q86XR7 235 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 REPS2Q8NFH8 660 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 NEDD1Q8NHV4 660 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 SNIP1Q8TAD8 396 aaKnown RBP8.58□□□□□ -1.04
BRCA1-214ENST00000477152 FSD1Q9BTV5 496 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 ACAD9Q9H845 621 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 SLC38A10Q9HBR0 1119 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 MTMR4Q9NYA4 1195 aa8.58□□□□□ -1.04
BRCA1-214ENST00000477152 TTC24A2A3L6 582 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 B4DLN1 442 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 ZIC2O95409 532 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 C6orf222P0C671 652 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 SLC1A4P43007 532 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 MRPL12P52815 198 aaKnown RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 KCNA10Q16322 511 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 NOL8Q76FK4 1167 aaKnown RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 IFNL3Q8IZI9 196 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 STAG1Q8WVM7 1258 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 AP5M1Q9H0R1 490 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 DNAJC25-GNG10A0A024R161 153 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 M0R2N6 131 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 SMARCA5O60264 1052 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 PLA2G6O60733 806 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 ADAMTS4O75173 837 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 TIMP1P01033 207 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 GNASQ5JWF2 1037 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 CYP2U1Q7Z449 544 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 STK11IPQ8N1F8 1099 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 KLHDC9Q8NEP7 349 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 CEP95Q96GE4 821 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 GMCL1Q96IK5 515 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 FAM161BQ96MY7 647 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 RAVER2Q9HCJ3 691 aaKnown RBP8.57□□□□□ -1.04
BRCA1-214ENST00000477152 SYNRGQ9UMZ2 1314 aa8.57□□□□□ -1.04
BRCA1-214ENST00000477152 LOC102724159A0A0B4J2E5 919 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 A0A1W2PRU2 124 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 TRIM43BA6NCK2 446 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 FOSL2P15408 326 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 GJA9P57773 515 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 TFAP4Q01664 338 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 PPARAQ07869 468 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 PWP2Q15269 919 aaKnown RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 BRDTQ58F21 947 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 RCSD1Q6JBY9 416 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 PSRC1Q6PGN9 363 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 ARMCX2Q7L311 632 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 MAFAQ8NHW3 353 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 OSBP2Q969R2 916 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 TRIM43Q96BQ3 446 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
BRCA1-214ENST00000477152 NUP88Q99567 741 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 ADD3Q9UEY8 706 aaKnown RBP8.56□□□□□ -1.04
BRCA1-214ENST00000477152 IGKV6D-41A0A0C4DH26 115 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 ARVCFO00192 962 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 ASGR1P07306 291 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 SMPD1P17405 629 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 NT5C2P49902 561 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 WDR4P57081 412 aaKnown RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 RELBQ01201 579 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 TNFAIP2Q03169 654 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 C1orf216Q8TAB5 229 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 GUCD1Q96NT3 240 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 GAS2L1Q99501 681 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 MSRAQ9UJ68 235 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 STX8Q9UNK0 236 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 Q9Y3F1 56 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 V9GY48 417 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 RAD50Q92878 1312 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 TAL1P17542 331 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 RAB30Q15771 203 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 C9orf50Q5SZB4 431 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 IQSEC1Q6DN90 963 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 RPUSD2Q8IZ73 545 aaKnown RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 LRRC47Q8N1G4 583 aaKnown RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 DCAF4Q8WV16 495 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 HPS1Q92902 700 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
BRCA1-214ENST00000477152 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms