RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 RXFP1Q9HBX9 757 aa4.81□□□□□ -1.64
NPHP3-207ENST00000476742 FBLN5Q9UBX5 448 aa4.81□□□□□ -1.64
NPHP3-207ENST00000476742 KRIT1O00522 736 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 MSCO60682 206 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 EFCAB14O75071 495 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 ZNF200P98182 395 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-207ENST00000476742 CIAPIN1Q6FI81 312 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 MTDHQ86UE4 582 aaKnown RBP4.8□□□□□ -1.64
NPHP3-207ENST00000476742 CXorf38Q8TB03 319 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 MZB1Q8WU39 189 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 KISS1RQ969F8 398 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-207ENST00000476742 SIGLEC10Q96LC7 697 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 RNF38Q9H0F5 515 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 GCM1Q9NP62 436 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 FBXL7Q9UJT9 491 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
NPHP3-207ENST00000476742 SMG5Q9UPR3 1016 aaKnown RBP4.8□□□□□ -1.64
NPHP3-207ENST00000476742 FAN1Q9Y2M0 1017 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 TRAF6Q9Y4K3 522 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 IRAK3Q9Y616 596 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 PTCH2Q9Y6C5 1203 aa4.8□□□□□ -1.64
NPHP3-207ENST00000476742 FAM47E-STBD1D6RA91 191 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 RFXAPO00287 272 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 HGSO14964 777 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-207ENST00000476742 BUB1BO60566 1050 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-207ENST00000476742 NCAM1P13591 858 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 GRK2P25098 689 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 GRK3P35626 688 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 CDR1P51861 262 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 PAK1Q13153 545 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 KCNA10Q16322 511 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 STEAP3Q658P3 488 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 PIF1Q9H611 641 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 CD320Q9NPF0 282 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 SIT1Q9Y3P8 196 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 NUB1Q9Y5A7 615 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 HCFC2Q9Y5Z7 792 aa4.79□□□□□ -1.64
NPHP3-207ENST00000476742 IRS2Q9Y4H2 1338 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 SGSM2O43147 1006 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 SOD2P04179 222 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 C6orf222P0C671 652 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-207ENST00000476742 EPHB3P54753 998 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 NCKAP1LP55160 1127 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 GUCY1A3Q02108 690 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 ZNF385BQ569K4 471 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 MILR1Q7Z6M3 343 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 NLGN1Q8N2Q7 840 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 SH3TC2Q8TF17 1288 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.78□□□□□ -1.64
NPHP3-207ENST00000476742 DDX11Q96FC9 970 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 YIPF4Q9BSR8 244 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 JAM3Q9BX67 310 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 MRPL4Q9BYD3 311 aaKnown RBP4.78□□□□□ -1.64
NPHP3-207ENST00000476742 NDOR1Q9UHB4 597 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 PALD1Q9ULE6 856 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 ZNF652Q9Y2D9 606 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 PCDHB4Q9Y5E5 795 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 PCDHA5Q9Y5H7 936 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 ASXL2Q76L83 1435 aa4.78□□□□□ -1.64
NPHP3-207ENST00000476742 GSTA4O15217 222 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 ASGR2P07307 311 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 GNAT1P11488 350 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 PMLP29590 882 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 LINC00310P59036 64 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 ST5P78524 1137 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 EMC4Q5J8M3 183 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 ETV3LQ6ZN32 361 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 ZC3H18Q86VM9 953 aaKnown RBP4.77□□□□□ -1.65
NPHP3-207ENST00000476742 IGDCC3Q8IVU1 814 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 PHOSPHO1Q8TCT1 267 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 PANK1Q8TE04 598 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 MAGEB10Q96LZ2 347 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-207ENST00000476742 KCNJ15Q99712 375 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 CDIP1Q9H305 208 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 SMOC1Q9H4F8 434 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 PCDH18Q9HCL0 1135 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 SLC6A20Q9NP91 592 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 NGRNQ9NPE2 291 aaKnown RBP4.77□□□□□ -1.65
NPHP3-207ENST00000476742 PPARGC1AQ9UBK2 798 aaKnown RBP4.77□□□□□ -1.65
NPHP3-207ENST00000476742 SFMBT1Q9UHJ3 866 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 KCTD3Q9Y597 815 aa4.77□□□□□ -1.65
NPHP3-207ENST00000476742 IRS4O14654 1257 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-207ENST00000476742 PLD2O14939 933 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 NUAK1O60285 661 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 CRTAMO95727 393 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 FAM47CQ5HY64 1035 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 OTOP3Q7RTS5 596 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 NOP9Q86U38 636 aaKnown RBP4.76□□□□□ -1.65
NPHP3-207ENST00000476742 HOMER1Q86YM7 354 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 TMEM151BQ8IW70 566 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 TRIM48Q8IWZ4 208 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 SYNPOQ8N3V7 929 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 PIP4K2CQ8TBX8 421 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 CPA5Q8WXQ8 436 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 FBXW5Q969U6 566 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 BCAS3Q9H6U6 928 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 IPPKQ9H8X2 491 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 SLC52A2Q9HAB3 445 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms