RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 VTA1Q9NP79 307 aa7.7□□□□□ -1.18
CLDN4-205ENST00000476494 FBXO40Q9UH90 709 aa7.7□□□□□ -1.18
CLDN4-205ENST00000476494 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
CLDN4-205ENST00000476494 IGF2RP11717 2491 aa7.7□□□□□ -1.18
CLDN4-205ENST00000476494 KIAA1671Q9BY89 1806 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 PLXNA4Q9HCM2 1894 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 C2CD4DB7Z1M9 353 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 KPNA6O60684 536 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 ITGB1P05556 798 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 ASGR2P07307 311 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 SP9P0CG40 484 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 DMWDQ09019 674 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 OS9Q13438 667 aaPredicted RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 HIC1Q14526 733 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 VARS2Q5ST30 1063 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 ZBTB33Q86T24 672 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 MAML2Q8IZL2 1156 aaPredicted RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 MIGA1Q8NAN2 632 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 PRPF38AQ8NAV1 312 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 FLCNQ8NFG4 579 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 P2RX5Q93086 422 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 ZNF689Q96CS4 500 aaPredicted RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 PURBQ96QR8 312 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 NUP88Q99567 741 aaPredicted RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 HINFPQ9BQA5 517 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 RIOK1Q9BRS2 568 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 PLVAPQ9BX97 442 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 WDR11Q9BZH6 1224 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 PIH1D3Q9NQM4 214 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 SNRKQ9NRH2 765 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 DLGAP2Q9P1A6 1054 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 CDH22Q9UJ99 828 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 ANGPTL2Q9UKU9 493 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 CDV3Q9UKY7 258 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 ZMIZ1Q9ULJ6 1067 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 AKAP2Q9Y2D5 859 aa7.69□□□□□ -1.18
CLDN4-205ENST00000476494 DSPP15924 2871 aaKnown RBP7.69□□□□□ -1.18
CLDN4-205ENST00000476494 GREB1LQ9C091 1923 aaPredicted RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 TAF4O00268 1085 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 EIF5BO60841 1220 aaKnown RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 UPP2O95045 317 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 SP100P23497 879 aaPredicted RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 USP5P45974 858 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 OAZ1P54368 228 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 ZNF200P98182 395 aaPredicted RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 RBM23Q86U06 439 aaKnown RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 LURAP1LQ8IV03 231 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 FIBCD1Q8N539 461 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 KDF1Q8NAX2 398 aaPredicted RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 IL17RAQ96F46 866 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 LNPKQ9C0E8 428 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 MFSD1Q9H3U5 465 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 SH2D4AQ9H788 454 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 GPHNQ9NQX3 736 aaPredicted RBP7.68□□□□□ -1.18
CLDN4-205ENST00000476494 GTF2IRD1Q9UHL9 959 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 EXOC6BQ9Y2D4 811 aa7.68□□□□□ -1.18
CLDN4-205ENST00000476494 SLC30A4O14863 429 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 CYP2D6P10635 497 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 CYP7A1P22680 504 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 LMNB2Q03252 620 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 PTK7Q13308 1070 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 CLASRPQ8N2M8 674 aaKnown RBP7.67□□□□□ -1.18
CLDN4-205ENST00000476494 OR6J1Q8NGC5 347 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 RHPN1Q8TCX5 695 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 RIN2Q8WYP3 895 aaPredicted RBP7.67□□□□□ -1.18
CLDN4-205ENST00000476494 COPS5Q92905 334 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 DYNLL2Q96FJ2 89 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 NEUROD6Q96NK8 337 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 TMEM121BQ9BXQ6 578 aaPredicted RBP7.67□□□□□ -1.18
CLDN4-205ENST00000476494 OSBPL3Q9H4L5 887 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 ERVK-5Q9HDB9 667 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 PARD6AQ9NPB6 346 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 GPR108Q9NPR9 543 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 RWDD3Q9Y3V2 267 aa7.67□□□□□ -1.18
CLDN4-205ENST00000476494 PER2O15055 1255 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 CSPG5O95196 566 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 POLR3DP05423 398 aaPredicted RBP7.66□□□□□ -1.18
CLDN4-205ENST00000476494 UQCRFS1P1P0C7P4 283 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 SLC4A3P48751 1232 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 RING1Q06587 406 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 DUSP6Q16828 381 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 NAALADL2Q58DX5 795 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 ANKRD54Q6NXT1 300 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 ZC3H14Q6PJT7 736 aaKnown RBP7.66□□□□□ -1.18
CLDN4-205ENST00000476494 CERS3Q8IU89 383 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 ZDHHC14Q8IZN3 488 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 PPP2R3CQ969Q6 453 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 GPATCH3Q96I76 525 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 CCDC17Q96LX7 622 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 IFIH1Q9BYX4 1025 aaKnown RBP7.66□□□□□ -1.18
CLDN4-205ENST00000476494 POMKQ9H5K3 350 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 ACAD9Q9H845 621 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 KANSL2Q9H9L4 492 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 GOPCQ9HD26 462 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 CYP39A1Q9NYL5 469 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 HDAC6Q9UBN7 1215 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 LIMD1Q9UGP4 676 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms