RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FNDC3BQ53EP0 1204 aaKnown RBP7.19□□□□□ -1.26
PTCD3-211ENST00000476215 TRIM61Q5EBN2 209 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 TCERG1LQ5VWI1 586 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 BICRALQ6AI39 1079 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 LBX2Q6XYB7 198 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 KIAA0907Q7Z7F0 614 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-211ENST00000476215 TEX2Q8IWB9 1127 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 LZTR1Q8N653 840 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 CLUHP3Q96NS8 147 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-211ENST00000476215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.19□□□□□ -1.26
PTCD3-211ENST00000476215 FBXL7Q9UJT9 491 aa7.19□□□□□ -1.26
PTCD3-211ENST00000476215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-211ENST00000476215 CRTAMO95727 393 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 APPP05067 770 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 FPR2P25090 351 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 KIZQ2M2Z5 673 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 EGFLAMQ63HQ2 1017 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 CEP68Q76N32 757 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 BRAPQ7Z569 592 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 Q8N1Y9 231 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 GSTCDQ8NEC7 633 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTCD3-211ENST00000476215 PANK1Q8TE04 598 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 TRMT2BQ96GJ1 504 aaKnown RBP7.18□□□□□ -1.26
PTCD3-211ENST00000476215 TMEM169Q96HH4 297 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 MAGEB10Q96LZ2 347 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-211ENST00000476215 CLDND1Q9NY35 253 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
PTCD3-211ENST00000476215 KCNQ2O43526 872 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 RFPL3O75679 317 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 NAT1P18440 290 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 ZNF200P98182 395 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-211ENST00000476215 TARBP2Q15633 366 aaKnown RBP7.17□□□□□ -1.26
PTCD3-211ENST00000476215 TAF7LQ5H9L4 462 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 NLRP10Q86W26 655 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 KCNC2Q96PR1 638 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 ALG1Q9BT22 464 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 HCFC2Q9Y5Z7 792 aa7.17□□□□□ -1.26
PTCD3-211ENST00000476215 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 C22orf46C9J442 243 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 BUB1BO60566 1050 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-211ENST00000476215 RASGRP1O95267 797 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 PFKLP17858 780 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 GYS2P54840 703 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 PRR5P85299 388 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 DALRD3Q5D0E6 543 aaKnown RBP7.16□□□□□ -1.26
PTCD3-211ENST00000476215 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 CABP7Q86V35 215 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 NIM1KQ8IY84 436 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 FAM177A1Q8N128 213 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-211ENST00000476215 PLEKHO2Q8TD55 490 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 NINJ1Q92982 152 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 SCLYQ96I15 445 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 TRIM39Q9HCM9 518 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
PTCD3-211ENST00000476215 PLAAQ9Y263 795 aa7.16□□□□□ -1.26
PTCD3-211ENST00000476215 ZC3H12DA2A288 527 aaKnown RBP7.15□□□□□ -1.26
PTCD3-211ENST00000476215 F8W031 263 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-211ENST00000476215 H7BY64 318 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 SOD2P04179 222 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 GRK2P25098 689 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 GRK3P35626 688 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 AFF3P51826 1226 aaKnown RBP7.15□□□□□ -1.26
PTCD3-211ENST00000476215 PAK1Q13153 545 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 SLC9A5Q14940 896 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 CNKSR3Q6P9H4 555 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 DHX37Q8IY37 1157 aaKnown RBP7.15□□□□□ -1.26
PTCD3-211ENST00000476215 MARCH10Q8NA82 808 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-211ENST00000476215 CPA5Q8WXQ8 436 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 PEX11GQ96HA9 241 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.26
PTCD3-211ENST00000476215 COA3Q9Y2R0 106 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-211ENST00000476215 TRIM13O60858 407 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 SDSP20132 328 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 HTRA3P83110 453 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 WWC2Q6AWC2 1192 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 ZC3H7AQ8IWR0 971 aaKnown RBP7.14□□□□□ -1.27
PTCD3-211ENST00000476215 KCNJ15Q99712 375 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 JAM3Q9BX67 310 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 IPPKQ9H8X2 491 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 X6R8D5 127 aa7.14□□□□□ -1.27
PTCD3-211ENST00000476215 TCRBV16S1A1N1A0A5B0 115 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 FAM47E-STBD1D6RA91 191 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 ARVCFO00192 962 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 OPA1O60313 960 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 DNAJC8O75937 253 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-211ENST00000476215 ZBTB7AO95365 584 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 NTRK1P04629 796 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 ASGR2P07307 311 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 INHBBP09529 407 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 SRGAP2CP0DJJ0 459 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 ATF2P15336 505 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 NCKAP1LP55160 1127 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 MROH9Q5TGP6 573 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 RIOX2Q8IUF8 465 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 LINC01356Q8N9X3 169 aa7.13□□□□□ -1.27
PTCD3-211ENST00000476215 MFSD3Q96ES6 412 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms