RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 DHX58Q96C10 678 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 EPSTI1Q96J88 318 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 CUEDC2Q9H467 287 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 TTC12Q9H892 705 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-227ENST00000475832 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 TCEAL9Q9UHQ7 104 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 ADGRA2Q96PE1 1338 aa13.78□□□□□ -0.2
MRPL55-227ENST00000475832 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 SLFN14P0C7P3 912 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 CCND2P30279 289 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-227ENST00000475832 IL17AQ16552 155 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 PCNX4Q63HM2 1172 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 RBM43Q6ZSC3 357 aaKnown RBP13.77□□□□□ -0.21
MRPL55-227ENST00000475832 PLA2G4DQ86XP0 818 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 IGSF22Q8N9C0 903 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
MRPL55-227ENST00000475832 PANK2Q9BZ23 570 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 MROH8Q9H579 483 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 KCNMB3Q9NPA1 279 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 ADD3Q9UEY8 706 aaKnown RBP13.77□□□□□ -0.21
MRPL55-227ENST00000475832 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 CENPFP49454 3210 aa13.77□□□□□ -0.21
MRPL55-227ENST00000475832 STAM2O75886 525 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 EN2P19622 333 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-227ENST00000475832 MRE11P49959 708 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 C17orf99Q6UX52 265 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 ANP32BQ92688 251 aaKnown RBP13.76□□□□□ -0.21
MRPL55-227ENST00000475832 TAAR1Q96RJ0 339 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 WDR11Q9BZH6 1224 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 LRRC27Q9C0I9 530 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
MRPL55-227ENST00000475832 NT5C3AQ9H0P0 336 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 PXMP2Q9NR77 195 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 ANO10Q9NW15 660 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 CYP39A1Q9NYL5 469 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 KIAA1468Q9P260 1216 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 SERTAD1Q9UHV2 236 aa13.76□□□□□ -0.21
MRPL55-227ENST00000475832 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 FAM86B1E9PN63 330 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 MEIS1O00470 390 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 BCRP11274 1271 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
MRPL55-227ENST00000475832 EIF2AK2P19525 551 aaKnown RBP13.75□□□□□ -0.21
MRPL55-227ENST00000475832 UBXN2AP68543 259 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 AMPD3Q01432 767 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 SP3Q02447 781 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 TYRO3Q06418 890 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 KCTD2Q14681 263 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 POSTNQ15063 836 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 STX1AQ16623 288 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 GPRC5AQ8NFJ5 357 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 HAS1Q92839 578 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
MRPL55-227ENST00000475832 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 IWS1Q96ST2 819 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 PDCD2LQ9BRP1 358 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 ZNF577Q9BSK1 485 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 MOV10L1Q9BXT6 1211 aaKnown RBP13.75□□□□□ -0.21
MRPL55-227ENST00000475832 A1CFQ9NQ94 594 aaKnown RBP13.75□□□□□ -0.21
MRPL55-227ENST00000475832 DISC1Q9NRI5 854 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 TRIM17Q9Y577 477 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
MRPL55-227ENST00000475832 KIAA0100Q14667 2235 aaKnown RBP13.75□□□□□ -0.21
MRPL55-227ENST00000475832 MSH4O15457 936 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 MAFGO15525 162 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 EDIL3O43854 480 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 GAS7O60861 476 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 MYL1P05976 194 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 ERCC3P19447 782 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-227ENST00000475832 ERVK-9P63128 1117 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 ERVK-24P63145 666 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 CAP1Q01518 475 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
MRPL55-227ENST00000475832 PGM5Q15124 567 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 WDR78Q5VTH9 848 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 ETNPPLQ8TBG4 499 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 SMARCE1Q969G3 411 aa13.74□□□□□ -0.21
MRPL55-227ENST00000475832 RIT2Q99578 217 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms