RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 NLRP4Q96MN2 994 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 PUS7LQ9H0K6 701 aaKnown RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 PTPREP23469 700 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 KIF24Q5T7B8 1368 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 PPFIA4O75335 1185 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 BMP3P12645 472 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 HP1BP3Q5SSJ5 553 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 TTC30BQ8N4P2 665 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 EPB41L5Q9HCM4 733 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 OLA1Q9NTK5 396 aaKnown RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 TYW5A2RUC4 315 aaKnown RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 SFI1A8K8P3 1242 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 FOSP01100 380 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 ADD2P35612 726 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
VAPB-204ENST00000475243 SERPINB13Q9UIV8 391 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 BNIP3LO60238 219 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 METTL23Q86XA0 190 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 HAUS4Q9H6D7 363 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 IRAK4Q9NWZ3 460 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 EFCAB8A8MWE9 144 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 SGO2Q562F6 1265 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 GBP5Q96PP8 586 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 MAN1B1Q9UKM7 699 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 SMIM24O75264 130 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 MAP7D3Q8IWC1 876 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 CCDC17Q96LX7 622 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 ACCSQ96QU6 501 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 MOCS3O95396 460 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 S100BP04271 92 aaPredicted RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 ZKSCAN8Q15776 578 aaPredicted RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 PPP1R12AO14974 1030 aaPredicted RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 ZSCAN20P17040 1043 aaPredicted RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 LIG3P49916 1009 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 COG7P83436 770 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 HVCN1Q96D96 273 aa11.9□□□□□ -0.5
VAPB-204ENST00000475243 MRPL46Q9H2W6 279 aaKnown RBP11.9□□□□□ -0.5
VAPB-204ENST00000475243 WDR91A4D1P6 747 aa11.9□□□□□ -0.51
VAPB-204ENST00000475243 GOLGA8IPA6NC78 632 aa11.9□□□□□ -0.51
VAPB-204ENST00000475243 GOLGA8JA6NMD2 632 aa11.9□□□□□ -0.51
VAPB-204ENST00000475243 ZNF18P17022 549 aa11.9□□□□□ -0.51
VAPB-204ENST00000475243 PYCARDQ9ULZ3 195 aa11.9□□□□□ -0.51
VAPB-204ENST00000475243 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.51
VAPB-204ENST00000475243 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 FTCDO95954 541 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 IQCB1Q15051 598 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 P2RX5Q93086 422 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 IFT122Q9HBG6 1241 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 GPC4O75487 556 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 PCP11498 1178 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 PLTPP55058 493 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 LRGUKQ96M69 825 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 HIP1RO75146 1068 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 CPP00450 1065 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 BASP1P80723 227 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 CDO1Q16878 200 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 BPIFB4P59827 614 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 SLC7A5Q01650 507 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 CFAP36Q96G28 342 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 RNF26Q9BY78 433 aaPredicted RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 INTS9Q9NV88 658 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 SRP68Q9UHB9 627 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 PPP6R2O75170 966 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 CCNA1P78396 465 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 SUPT20HL1Q3ZLR7 823 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 AIFM3Q96NN9 605 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 ABT1Q9ULW3 272 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 SLCO1A2P46721 670 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 PDXDC2PQ6P474 469 aa11.89□□□□□ -0.51
VAPB-204ENST00000475243 CACTINQ8WUQ7 758 aaKnown RBP11.89□□□□□ -0.51
VAPB-204ENST00000475243 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 MCF2LO15068 1137 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 TMED2Q15363 201 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 MAP3K21Q5TCX8 1036 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 NACC1Q96RE7 527 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 SUDS3Q9H7L9 328 aaPredicted RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 LRRC4Q9HBW1 653 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 RGS12O14924 1447 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 GABPB1Q06547 395 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms