RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 HAS3O00219 553 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 OPLAHO14841 1288 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 SORBS3O60504 671 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 PPFIA4O75335 1185 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 IKBKEQ14164 716 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
SRRT-209ENST00000474896 ZNF618Q5T7W0 954 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 RAD9AQ99638 391 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 RGS20O76081 388 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 GJB5O95377 273 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 F2P00734 622 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
SRRT-209ENST00000474896 CELF3Q5SZQ8 465 aaKnown RBP18.16■□□□□ 0.5
SRRT-209ENST00000474896 MYSM1Q5VVJ2 828 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 FAM117BQ6P1L5 589 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 WNT8BQ93098 351 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 PDCD2LQ9BRP1 358 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 MAP3K20Q9NYL2 800 aaKnown RBP18.16■□□□□ 0.5
SRRT-209ENST00000474896 MTUS1Q9ULD2 1270 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 PCDHA1Q9Y5I3 950 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 TRANK1O15050 2925 aa18.16■□□□□ 0.5
SRRT-209ENST00000474896 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 ZBTB5O15062 677 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
SRRT-209ENST00000474896 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
SRRT-209ENST00000474896 SP2Q02086 613 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 HIC1Q14526 733 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 KCNV1Q6PIU1 500 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 TRAF7Q6Q0C0 670 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 VSIG10LQ86VR7 867 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 GDPD5Q8WTR4 605 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 MTMR8Q96EF0 704 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
SRRT-209ENST00000474896 SPATA33Q96N06 139 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 SUGCTQ9HAC7 445 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 LMCD1Q9NZU5 365 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 MAD2L2Q9UI95 211 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 XIRP2A4UGR9 3374 aa18.15■□□□□ 0.5
SRRT-209ENST00000474896 EFCAB14O75071 495 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 GGPS1O95749 300 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 HOXD8P13378 290 aaPredicted RBP18.14■□□□□ 0.49
SRRT-209ENST00000474896 ERVK-21P61565 698 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 GHRHRQ02643 423 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 MBTPS1Q14703 1052 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 PGM5Q15124 567 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 SEC23AQ15436 765 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 HSDL1Q3SXM5 330 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 CYB5R4Q7L1T6 521 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 TGS1Q96RS0 853 aaKnown RBP18.14■□□□□ 0.49
SRRT-209ENST00000474896 EPHX3Q9H6B9 360 aa18.14■□□□□ 0.49
SRRT-209ENST00000474896 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 PALM3A6NDB9 673 aaPredicted RBP18.13■□□□□ 0.49
SRRT-209ENST00000474896 LGR5O75473 907 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 TGFB3P10600 412 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRRT-209ENST00000474896 SAMD3Q8N6K7 520 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 IL31RAQ8NI17 732 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 MLXIPQ9HAP2 919 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
SRRT-209ENST00000474896 RSPH10B2B2RC85 870 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
SRRT-209ENST00000474896 RSPH10BP0C881 870 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 THPOP40225 353 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 DBF4BQ8NFT6 615 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 GPKOWQ92917 476 aaPredicted RBP eCLIP18.12■□□□□ 0.49
SRRT-209ENST00000474896 C16orf70Q9BSU1 422 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 IL25Q9H293 177 aa18.12■□□□□ 0.49
SRRT-209ENST00000474896 BAZ2BQ9UIF8 2168 aaKnown RBP18.11■□□□□ 0.49
SRRT-209ENST00000474896 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
SRRT-209ENST00000474896 CCND2P30279 289 aa18.11■□□□□ 0.49
SRRT-209ENST00000474896 SLC35G1Q2M3R5 365 aa18.11■□□□□ 0.49
SRRT-209ENST00000474896 SERINC5Q86VE9 423 aa18.11■□□□□ 0.49
SRRT-209ENST00000474896 PIGSQ96S52 555 aa18.11■□□□□ 0.49
SRRT-209ENST00000474896 BCAS3Q9H6U6 928 aa18.11■□□□□ 0.49
SRRT-209ENST00000474896 INSL6Q9Y581 213 aa18.11■□□□□ 0.49
SRRT-209ENST00000474896 EMSYQ7Z589 1322 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 C17orf102A2RUQ5 167 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 H3BRB1 525 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 AMHP03971 560 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 TRDNQ13061 729 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 TRAF1Q13077 416 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 ATP6V0A1Q93050 837 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 FAM122AQ96E09 287 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 TUT1Q9H6E5 874 aaKnown RBP18.1■□□□□ 0.49
SRRT-209ENST00000474896 RIOX1Q9H6W3 641 aa18.1■□□□□ 0.49
SRRT-209ENST00000474896 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
SRRT-209ENST00000474896 BRWD1Q9NSI6 2320 aa18.09■□□□□ 0.49
SRRT-209ENST00000474896 GRM4Q14833 912 aa18.09■□□□□ 0.49
SRRT-209ENST00000474896 CENPQQ7L2Z9 268 aaPredicted RBP18.09■□□□□ 0.49
SRRT-209ENST00000474896 MYOCDQ8IZQ8 938 aa18.09■□□□□ 0.49
SRRT-209ENST00000474896 C17orf80Q9BSJ5 609 aa18.09■□□□□ 0.49
SRRT-209ENST00000474896 LRFN3Q9BTN0 628 aa18.09■□□□□ 0.49
SRRT-209ENST00000474896 RNPEPQ9H4A4 650 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms