RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 DDX25Q9UHL0 483 aaKnown RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 TUBE1Q9UJT0 475 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 RIPK3Q9Y572 518 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 A0A0G2JMZ2 1700 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 PASKQ96RG2 1323 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 PTPRFP10586 1907 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 A0A087X0B3 334 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 SYCE3A1L190 88 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 VWA3AA6NCI4 1184 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 FAM86B1E9PN63 330 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 EVI5O60447 810 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 GFRA3O60609 400 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 CELF2O95319 508 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 CFBP00751 764 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 FAM86B2P0C5J1 330 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 SLFN14P0C7P3 912 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 HSPA1AP0DMV8 641 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 HSPA1BP0DMV9 641 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 HOXA13P31271 388 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 COPB2P35606 906 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 STAT3P40763 770 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 SARSP49591 514 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 HERVK_113P62684 666 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 RPS6P62753 249 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 SPIRE1Q08AE8 756 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 CALCRLQ16602 461 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 HYIQ5T013 277 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 KANK3Q6NY19 840 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 B3GNT9Q6UX72 402 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 ANKRD23Q86SG2 305 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 SLFN12Q8IYM2 578 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 EPSTI1Q96J88 318 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 TRERF1Q96PN7 1200 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 MMTAG2Q9BU76 263 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 ASCC2Q9H1I8 757 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 TNMDQ9H2S6 317 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 EHMT1Q9H9B1 1298 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 ZCCHC17Q9NP64 241 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 RNF146Q9NTX7 359 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 BTBD7Q9P203 1132 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 KIAA1468Q9P260 1216 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 RBPJLQ9UBG7 517 aa7.48□□□□□ -1.21
ATG4A-207ENST00000474825 ABT1Q9ULW3 272 aaKnown RBP7.48□□□□□ -1.21
ATG4A-207ENST00000474825 POLR2DO15514 142 aaKnown RBP7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CAVIN2O95810 425 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SLC25A27O95847 323 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CETPP11597 493 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 ALAS1P13196 640 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 OSBPP22059 807 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 GTF2A2P52657 109 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CEP55Q53EZ4 464 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 NAALADL2Q58DX5 795 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SPECC1Q5M775 1068 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 PCNX4Q63HM2 1172 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SNRNP48Q6IEG0 339 aaKnown RBP7.47□□□□□ -1.21
ATG4A-207ENST00000474825 PDXDC2PQ6P474 469 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 GADL1Q6ZQY3 521 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CPXCR1Q8N123 301 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 IQUBQ8NA54 791 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SHCBP1Q8NEM2 672 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 BRI3BPQ8WY22 251 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SLC5A5Q92911 643 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 MXRA8Q9BRK3 442 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 PDCD2LQ9BRP1 358 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SPATC1LQ9H0A9 340 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CUEDC2Q9H467 287 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 ACAD9Q9H845 621 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 A1CFQ9NQ94 594 aaKnown RBP7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CYP39A1Q9NYL5 469 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 MORF4L1Q9UBU8 362 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 FBXO40Q9UH90 709 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 UBIAD1Q9Y5Z9 338 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 CEP350Q5VT06 3117 aa7.47□□□□□ -1.21
ATG4A-207ENST00000474825 SMCHD1A6NHR9 2005 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 LOC102724159A0A0B4J2E5 919 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 BTBD19C9JJ37 291 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 MSH4O15457 936 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 MAFGO15525 162 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 PSMD10O75832 226 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 STAM2O75886 525 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 MYL1P05976 194 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 CCDC192P0DO97 292 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 EDNRBP24530 442 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 VEGFBP49765 207 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 MRE11P49959 708 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
ATG4A-207ENST00000474825 SETQ01105 290 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-207ENST00000474825 MAP2K1Q02750 393 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-207ENST00000474825 TYRO3Q06418 890 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 BAATQ14032 418 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-207ENST00000474825 PWP2Q15269 919 aaKnown RBP7.46□□□□□ -1.22
ATG4A-207ENST00000474825 CAMK4Q16566 473 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 PROX2Q3B8N5 592 aa7.46□□□□□ -1.22
ATG4A-207ENST00000474825 COL13A1Q5TAT6 717 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms