RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 CROTQ9UKG9 612 aa5.87□□□□□ -1.47
TMEM50B-208ENST00000474272 WASF3Q9UPY6 502 aa5.87□□□□□ -1.47
TMEM50B-208ENST00000474272 PCDHA2Q9Y5H9 948 aa5.87□□□□□ -1.47
TMEM50B-208ENST00000474272 X6R8D5 127 aa5.87□□□□□ -1.47
TMEM50B-208ENST00000474272 C1QTNF3-AMACRE9PGA6 284 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 ZNF28P17035 718 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 KCNJ6P48051 423 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 NCAPHQ15003 741 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 PHF19Q5T6S3 580 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 IQCEQ6IPM2 695 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 RIOX2Q8IUF8 465 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 TTC9BQ8N6N2 239 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 DVL3Q92997 716 aaPredicted RBP5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 SEC16BQ96JE7 1060 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 LRP2BPQ9P2M1 347 aa5.86□□□□□ -1.47
TMEM50B-208ENST00000474272 TCRBV5S2A0A599 114 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 SMAD7O15105 426 aaKnown RBP5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 MEFVO15553 781 aaPredicted RBP5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 LAMTOR5O43504 91 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 ZNF143P52747 638 aaPredicted RBP5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 CDSNQ15517 529 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 LARP1BQ659C4 914 aaKnown RBP5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 ZNF227Q86WZ6 799 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 MBD6Q96DN6 1003 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 L2HGDHQ9H9P8 463 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 INPP5FQ9Y2H2 1132 aa5.85□□□□□ -1.47
TMEM50B-208ENST00000474272 HGSO14964 777 aaPredicted RBP5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 LRG1P02750 347 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 NAT2P11245 290 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 HOXC12P31275 282 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 STEAP3Q658P3 488 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 E4F1Q66K89 784 aaPredicted RBP5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 TMC5Q6UXY8 1006 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 PPIL6Q8IXY8 311 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 IGDCC4Q8TDY8 1250 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 MICAL1Q8TDZ2 1067 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 TOE1Q96GM8 510 aaKnown RBP5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 TMEM168Q9H0V1 697 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 COA3Q9Y2R0 106 aaPredicted RBP5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 ZDHHC9Q9Y397 364 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 PCDHB4Q9Y5E5 795 aa5.84□□□□□ -1.47
TMEM50B-208ENST00000474272 NPEPPSL1A6NEC2 478 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 GPR42O15529 346 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 MYO1BO43795 1136 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 B4GALT4O60513 344 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 C6P13671 934 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 TCF3P15923 654 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 ZNF585AQ6P3V2 769 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 TEPPQ6URK8 271 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 FAM178BQ8IXR5 827 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 PALM2Q8IXS6 379 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 Q8N1X5 172 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 Q8N1Y9 231 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 TMEM145Q8NBT3 493 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 ZCCHC14Q8WYQ9 949 aaKnown RBP5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 YTHDC1Q96MU7 727 aaKnown RBP5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 JADE2Q9NQC1 790 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 CLDND1Q9NY35 253 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 DTLQ9NZJ0 730 aa5.83□□□□□ -1.48
TMEM50B-208ENST00000474272 TADA3O75528 432 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 RANGAP1P46060 587 aaPredicted RBP5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 GTF2A2P52657 109 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 KCNAB2Q13303 367 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 LSAMPQ13449 338 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 ZFPM1Q8IX07 1006 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 RBM12BQ8IXT5 1001 aaKnown RBP5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 KBTBD2Q8IY47 623 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 KISS1RQ969F8 398 aaPredicted RBP5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 CLIC6Q96NY7 704 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 JAM3Q9BX67 310 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 KLC2Q9H0B6 622 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 NGRNQ9NPE2 291 aaKnown RBP5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 SRRDQ9UH36 339 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 ZNF652Q9Y2D9 606 aa5.82□□□□□ -1.48
TMEM50B-208ENST00000474272 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 SUSD5O60279 629 aa5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 DDAH1O94760 285 aa5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 ATF4P18848 351 aaPredicted RBP5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 LTBRP36941 435 aa5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 GRIA2P42262 883 aa5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 MRM1Q6IN84 353 aaKnown RBP5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 TRMT10BQ6PF06 316 aaKnown RBP5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 CD248Q9HCU0 757 aa5.81□□□□□ -1.48
TMEM50B-208ENST00000474272 SUV39H1O43463 412 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 AMHP03971 560 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 SCG5P05408 212 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 TACR2P21452 398 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 GFRA1P56159 465 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 PPP2CBP62714 309 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 PPP2CAP67775 309 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 GRIN1Q05586 938 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 WWC2-AS2Q96NR7 200 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 SORCS2Q96PQ0 1159 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 TGIF2Q9GZN2 237 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 DEF6Q9H4E7 631 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 ACTR10Q9NZ32 417 aa5.8□□□□□ -1.48
TMEM50B-208ENST00000474272 MYOTQ9UBF9 498 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms