RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 NRSN2Q9GZP1 204 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 MIR1-1HGQ9H1L0 117 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 NRDE2Q9H7Z3 1164 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 LUC7LQ9NQ29 371 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 QPCTLQ9NXS2 382 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 SPATA7Q9P0W8 599 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 KIAA0232Q92628 1395 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 ABCC11Q96J66 1382 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 PPLO60437 1756 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 BICDL2A1A5D9 508 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 TM4SF5O14894 197 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 TIMM44O43615 452 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 CYP11A1P05108 521 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 EZRP15311 586 aaKnown RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 CCNHP51946 323 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 NLRP12P59046 1061 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 SNRPNP63162 240 aaKnown RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 ZNF252P-AS1Q0IIN9 211 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 SEPT6Q14141 434 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 PLCB4Q15147 1175 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 POU4F3Q15319 338 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 LRRC23Q53EV4 343 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 RRP12Q5JTH9 1297 aaKnown RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 CDCA2Q69YH5 1023 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 IQCA1Q86XH1 822 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 MAP4K3Q8IVH8 894 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 SLC43A3Q8NBI5 491 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 TRIM11Q96F44 468 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 EAF1Q96JC9 268 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 CORO1BQ9BR76 489 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 TTC12Q9H892 705 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 L2HGDHQ9H9P8 463 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 KCNQ5Q9NR82 932 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 LMCD1Q9NZU5 365 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 SWAP70Q9UH65 585 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 NRAPQ86VF7 1730 aa8.2□□□□□ -1.1
GPNMB-209ENST00000474157 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
GPNMB-209ENST00000474157 NRXN1Q9ULB1 1477 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 KIF1AQ12756 1690 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 DEAF1O75398 565 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 KRT38O76015 456 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC159P0C7I6 412 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 FERP16591 822 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 ZNF24P17028 368 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 MAOBP27338 520 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 DNAJA1P31689 397 aaKnown RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 SLC8A1P32418 973 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 ROR2Q01974 943 aaKnown RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 LAMB3Q13751 1172 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 SUZ12Q15022 739 aaKnown RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC92Q53HC0 331 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC158Q5M9N0 1113 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 MAP1SQ66K74 1059 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 MPRIPQ6WCQ1 1025 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 BNC2Q6ZN30 1099 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 PTF1AQ7RTS3 328 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 LRRC49Q8IUZ0 686 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 PDILTQ8N807 584 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 CEP112Q8N8E3 955 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 ERMNQ8TAM6 284 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 MORC4Q8TE76 937 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 GAL3ST3Q96A11 431 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 MRFAP1L1Q96HT8 127 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 RSRC1Q96IZ7 334 aaKnown RBP8.19□□□□□ -1.1
GPNMB-209ENST00000474157 ALS2CR12Q96Q35 445 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 USP26Q9BXU7 913 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 ATP6V0A4Q9HBG4 840 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 SHANK3Q9BYB0 1731 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 OVOS2A0A0G2JMS6 1433 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 OVOS2A0A0J9YW53 1432 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 OVOS2Q6IE36 1432 aa8.19□□□□□ -1.1
GPNMB-209ENST00000474157 CASZ1Q86V15 1759 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 NPHP1O15259 732 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 WIPF1O43516 503 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 GREM1O60565 184 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 CTSBP07858 339 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 IDO1P14902 403 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 OAS2P29728 719 aaKnown RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 LMAN1P49257 510 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 SH3BGRP55822 239 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 DYNC1I2Q13409 638 aaKnown RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 MCTP1Q6DN14 999 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 ARHGAP22Q7Z5H3 698 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 ELOA2Q8IYF1 753 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 RNF168Q8IYW5 571 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 DTWD1Q8N5C7 304 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 C3orf20Q8ND61 904 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 NLGN2Q8NFZ4 835 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 HOOK2Q96ED9 719 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 RBM17Q96I25 401 aaKnown RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 JPH2Q9BR39 696 aaPredicted RBP8.18□□□□□ -1.1
GPNMB-209ENST00000474157 RABEP2Q9H5N1 569 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms