RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SPATA31C1P0DKV0 1188 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 ARP10275 920 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 CATSPER3Q86XQ3 398 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 REPS2Q8NFH8 660 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 DDX12PQ92771 950 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 ZBED4O75132 1171 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 SSBP05455 408 aaKnown RBP eCLIP20.15■□□□□ 0.82
VARS2-206ENST00000473916 PSMC6P62333 389 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 AMPD3Q01432 767 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 CYP4A11Q02928 519 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 KIAA0895Q8NCT3 520 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 TRERF1Q96PN7 1200 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
VARS2-206ENST00000473916 RPTORQ8N122 1335 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 KDM3AQ9Y4C1 1321 aa20.15■□□□□ 0.82
VARS2-206ENST00000473916 NPHP3-ACAD11A0A0J9YXS1 232 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 ITGB5P18084 799 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 CEP55Q53EZ4 464 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 LRRC8AQ8IWT6 810 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 SYTL5Q8TDW5 730 aaPredicted RBP20.14■□□□□ 0.81
VARS2-206ENST00000473916 SLC39A2Q9NP94 309 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 C19orf81C9J6K1 198 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 CHMP2AO43633 222 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 PEX10O60683 326 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 RPS6P62753 249 aaKnown RBP20.14■□□□□ 0.81
VARS2-206ENST00000473916 MAP3K9P80192 1104 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 CACNB1Q02641 598 aaPredicted RBP20.14■□□□□ 0.81
VARS2-206ENST00000473916 ARMCX5Q6P1M9 558 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 CLMNQ96JQ2 1002 aa20.14■□□□□ 0.81
VARS2-206ENST00000473916 CBFA2T2O43439 604 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 IDEP14735 1019 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 DSG3P32926 999 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 GOLGA8FQ08AF8 430 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 RAD51AP2Q09MP3 1159 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 GOLGA8DPQ0D2H9 430 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 CATSPERGQ6ZRH7 1159 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 VSTM4Q8IW00 320 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 TEX2Q8IWB9 1127 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 GLIS3Q8NEA6 775 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 KIAA1524Q8TCG1 905 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 DNAJC19Q96DA6 116 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 L3MBTL3Q96JM7 780 aaPredicted RBP20.13■□□□□ 0.81
VARS2-206ENST00000473916 TAAR1Q96RJ0 339 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 NT5C3AQ9H0P0 336 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 RGL1Q9NZL6 768 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 PKD2L1Q9P0L9 805 aa20.13■□□□□ 0.81
VARS2-206ENST00000473916 PSMD10O75832 226 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 PLA2G4BP0C869 781 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 EIF2AK2P19525 551 aaKnown RBP20.12■□□□□ 0.81
VARS2-206ENST00000473916 EPHX2P34913 555 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 GHRHRQ02643 423 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 TMEM132BQ14DG7 1078 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 GPR162Q16538 588 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 TPD52L1Q16890 204 aaPredicted RBP20.12■□□□□ 0.81
VARS2-206ENST00000473916 TREML2Q5T2D2 321 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 LRCH2Q5VUJ6 765 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 SNRNP48Q6IEG0 339 aaKnown RBP20.12■□□□□ 0.81
VARS2-206ENST00000473916 NSMFQ6X4W1 530 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 UNC13DQ70J99 1090 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 MCF2L2Q86YR7 1114 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 SLC5A5Q92911 643 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 EEF2KMTQ96G04 330 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 EHMT1Q9H9B1 1298 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 RNF146Q9NTX7 359 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 TMOD4Q9NZQ9 345 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 ZNF214Q9UL59 606 aaPredicted RBP20.12■□□□□ 0.81
VARS2-206ENST00000473916 TEX33O43247 280 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 HAUS3Q68CZ6 603 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 DPY19L2Q6NUT2 758 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 OTOP1Q7RTM1 612 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 CDCA5Q96FF9 252 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 WDR11Q9BZH6 1224 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 ELP3Q9H9T3 547 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 ADAMTS5Q9UNA0 930 aa20.12■□□□□ 0.81
VARS2-206ENST00000473916 RPA1P27694 616 aa20.11■□□□□ 0.81
VARS2-206ENST00000473916 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
VARS2-206ENST00000473916 COG2Q14746 738 aa20.11■□□□□ 0.81
VARS2-206ENST00000473916 IRF2BP1Q8IU81 584 aa20.11■□□□□ 0.81
VARS2-206ENST00000473916 EIF2AK1Q9BQI3 630 aaKnown RBP20.11■□□□□ 0.81
VARS2-206ENST00000473916 MXRA8Q9BRK3 442 aa20.11■□□□□ 0.81
VARS2-206ENST00000473916 ZNF577Q9BSK1 485 aa20.11■□□□□ 0.81
VARS2-206ENST00000473916 IMPACTQ9P2X3 320 aa20.11■□□□□ 0.81
VARS2-206ENST00000473916 LCTP09848 1927 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 A0A1B0GTH6 734 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 SPDYE16A6NNV3 312 aaPredicted RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 SLC12A3P55017 1021 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CCZ1BP86790 482 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CCZ1P86791 482 aaPredicted RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 PABPC4Q13310 644 aaKnown RBP eCLIP20.1■□□□□ 0.812e-8■■■■□ 24.4
VARS2-206ENST00000473916 TTI2Q6NXR4 508 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 GPBP1Q86WP2 473 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 ERMNQ8TAM6 284 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 FGFBP2Q9BYJ0 223 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 PVALEFA0A1B0GWK0 134 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 DDX39AO00148 427 aaKnown RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 PSMA7O14818 248 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 PPP1R12BO60237 982 aaPredicted RBP20.1■□□□□ 0.81
VARS2-206ENST00000473916 GAS7O60861 476 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 CYP11B2P19099 503 aa20.1■□□□□ 0.81
VARS2-206ENST00000473916 EHHADHQ08426 723 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms