RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 KIF5BP33176 963 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 KCNJ6P48051 423 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 GPNMBQ14956 572 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 KIAA0753Q2KHM9 967 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 GNPTABQ3T906 1256 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 IGDCC4Q8TDY8 1250 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
CHD3-209ENST00000473376 SPZ1Q9BXG8 430 aa15.68■□□□□ 0.1
CHD3-209ENST00000473376 TNFRSF10AO00220 468 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 PIK3CDO00329 1044 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 CYTH3O43739 400 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 GNAQP50148 359 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 PTH1RQ03431 593 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 NEDD9Q14511 834 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
CHD3-209ENST00000473376 CHST3Q7LGC8 479 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 DHX38Q92620 1227 aaKnown RBP15.67■□□□□ 0.1
CHD3-209ENST00000473376 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
CHD3-209ENST00000473376 SPATA33Q96N06 139 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 PIGSQ96S52 555 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 C16orf70Q9BSU1 422 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 USP26Q9BXU7 913 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
CHD3-209ENST00000473376 TANC1Q9C0D5 1861 aa15.67■□□□□ 0.1
CHD3-209ENST00000473376 DDAH1O94760 285 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 GGPS1O95749 300 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 MYCLP12524 364 aaPredicted RBP15.66■□□□□ 0.1
CHD3-209ENST00000473376 MYOGP15173 224 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 UBA1P22314 1058 aaKnown RBP15.66■□□□□ 0.1
CHD3-209ENST00000473376 WDR5P61964 334 aaKnown RBP15.66■□□□□ 0.1
CHD3-209ENST00000473376 TAP1Q03518 808 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 IKBKEQ14164 716 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 SLC35G1Q2M3R5 365 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 HSDL1Q3SXM5 330 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 SERINC5Q86VE9 423 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 RAD9AQ99638 391 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 COG5Q9UP83 839 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 MTCH2Q9Y6C9 303 aa15.66■□□□□ 0.1
CHD3-209ENST00000473376 MYO9BQ13459 2157 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 SPATA31C2B4DYI2 1134 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 H3BRB1 525 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 TLL1O43897 1013 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 NBNO60934 754 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 GJB5O95377 273 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 GNAT1P11488 350 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 HOXA13P31271 388 aaPredicted RBP15.65■□□□□ 0.1
CHD3-209ENST00000473376 SP2Q02086 613 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 TRAF7Q6Q0C0 670 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 METTL7BQ6UX53 244 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 HOMER1Q86YM7 354 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 MB21D2Q8IYB1 491 aaPredicted RBP15.65■□□□□ 0.1
CHD3-209ENST00000473376 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
CHD3-209ENST00000473376 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
CHD3-209ENST00000473376 TMEM87BQ96K49 555 aa15.65■□□□□ 0.1
CHD3-209ENST00000473376 TUT1Q9H6E5 874 aaKnown RBP15.65■□□□□ 0.1
CHD3-209ENST00000473376 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
CHD3-209ENST00000473376 TRANK1O15050 2925 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 FIBPO43427 364 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 CALM1P0DP23 149 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 CALM2P0DP24 149 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 CALM3P0DP25 149 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 LIFRP42702 1097 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 PCNX4Q63HM2 1172 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 IL27Q8NEV9 243 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 RRP36Q96EU6 259 aaKnown RBP15.64■□□□□ 0.09
CHD3-209ENST00000473376 CDHR1Q96JP9 859 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 MYH6P13533 1939 aa15.64■□□□□ 0.09
CHD3-209ENST00000473376 LGR5O75473 907 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 ZNF286BP0CG31 522 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 MCM5P33992 734 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 ANTXR2P58335 489 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 CHMP4BP1P59074 171 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 MRPS9P82933 396 aaKnown RBP15.63■□□□□ 0.09
CHD3-209ENST00000473376 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
CHD3-209ENST00000473376 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 FCHSD1Q86WN1 690 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 IL31RAQ8NI17 732 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 CUL5Q93034 780 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 ALG1Q9BT22 464 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 LY9Q9HBG7 655 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
CHD3-209ENST00000473376 GBF1Q92538 1859 aa15.63■□□□□ 0.09
CHD3-209ENST00000473376 SCN5AQ14524 2016 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 C17orf102A2RUQ5 167 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 RSPH10B2B2RC85 870 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 NOP56O00567 594 aaKnown RBP15.62■□□□□ 0.09
CHD3-209ENST00000473376 MAFGO15525 162 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 LGALS2P05162 132 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 RPLP2P05387 115 aaKnown RBP15.62■□□□□ 0.09
CHD3-209ENST00000473376 RSPH10BP0C881 870 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 BMP1P13497 986 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 ERVK-21P61565 698 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 CCDC85BQ15834 202 aaPredicted RBP15.62■□□□□ 0.09
CHD3-209ENST00000473376 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 FAM43BQ6ZT52 329 aaPredicted RBP15.62■□□□□ 0.09
CHD3-209ENST00000473376 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
CHD3-209ENST00000473376 ZNF654Q8IZM8 581 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms