RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PPP1R18Q6NYC8 613 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 ZNF713Q8N859 430 aaPredicted RBP25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 PPP1R13LQ8WUF5 828 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 KAT2BQ92831 832 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 SPATA33Q96N06 139 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 USP26Q9BXU7 913 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 RTEL1Q9NZ71 1219 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 NID2Q14112 1375 aa25.91■■□□□ 1.74
PTP4A1-203ENST00000473334 FIBPO43427 364 aa25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 SORBS3O60504 671 aa25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 HOXD8P13378 290 aaPredicted RBP25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 NAPAP54920 295 aa25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 CHMP4BP1P59074 171 aa25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 KATNAL1Q9BW62 490 aa25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 MLXIPQ9HAP2 919 aa25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 V9GY48 417 aaPredicted RBP25.9■■□□□ 1.74
PTP4A1-203ENST00000473334 SPDYE3A6NKU9 549 aa25.89■■□□□ 1.74
PTP4A1-203ENST00000473334 CYP2C9P11712 490 aa25.89■■□□□ 1.74
PTP4A1-203ENST00000473334 ADD1P35611 737 aaKnown RBP25.89■■□□□ 1.74
PTP4A1-203ENST00000473334 HSDL1Q3SXM5 330 aa25.89■■□□□ 1.74
PTP4A1-203ENST00000473334 SESTD1Q86VW0 696 aa25.89■■□□□ 1.74
PTP4A1-203ENST00000473334 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.89■■□□□ 1.74
PTP4A1-203ENST00000473334 DOCK5Q9H7D0 1870 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 SPATA31C2B4DYI2 1134 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 PPFIA4O75335 1185 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 F2P00734 622 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 CCL23P55773 120 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 SEMA3FQ13275 785 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 TMEM240Q5SV17 173 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 TYW1BQ6NUM6 668 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 PSRC1Q6PGN9 363 aaPredicted RBP25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 RUFY3Q7L099 469 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 NLRX1Q86UT6 975 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 TEX2Q8IWB9 1127 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 WNT8AQ9H1J5 351 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 IL23AQ9NPF7 189 aa25.88■■□□□ 1.73
PTP4A1-203ENST00000473334 STXBP3O00186 592 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 ZNF286BP0CG31 522 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 PSEN2P49810 448 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 SMAD3P84022 425 aaKnown RBP25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 NEDD9Q14511 834 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 C16orf59Q7L2K0 433 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 DEFB123Q8N688 67 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 EHMT1Q9H9B1 1298 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 ZSWIM6Q9HCJ5 1215 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 RIC8AQ9NPQ8 531 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 BARHL2Q9NY43 387 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 PCDHA6Q9UN73 950 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 NOD1Q9Y239 953 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 PCDHA8Q9Y5H6 950 aa25.87■■□□□ 1.73
PTP4A1-203ENST00000473334 ACRP10323 421 aa25.86■■□□□ 1.73
PTP4A1-203ENST00000473334 MFSD10Q14728 455 aa25.86■■□□□ 1.73
PTP4A1-203ENST00000473334 Q7L0L9 218 aa25.86■■□□□ 1.73
PTP4A1-203ENST00000473334 TANC1Q9C0D5 1861 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 HAS3O00219 553 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 ADCY7P51828 1080 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 FAM109BQ6ICB4 259 aaPredicted RBP25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 METTL7BQ6UX53 244 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 ZNF365Q70YC5 407 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 GPRASP2Q96D09 838 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 SENP7Q9BQF6 1050 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 ALG1Q9BT22 464 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 TM6SF1Q9BZW5 370 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 BCAS3Q9H6U6 928 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 CYP46A1Q9Y6A2 500 aa25.85■■□□□ 1.73
PTP4A1-203ENST00000473334 NOP56O00567 594 aaKnown RBP25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 EVCP57679 992 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 PTGISQ16647 500 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 PFKFB3Q16875 520 aaPredicted RBP25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 KIAA0753Q2KHM9 967 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 GDF6Q6KF10 455 aaPredicted RBP25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 CYFIP1Q7L576 1253 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 C7orf31Q8N865 590 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 SCLYQ96I15 445 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 CDHR1Q96JP9 859 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 GLT8D2Q9H1C3 349 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 HDAC6Q9UBN7 1215 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 GTF2IRD1Q9UHL9 959 aa25.84■■□□□ 1.73
PTP4A1-203ENST00000473334 SMCO2A6NFE2 343 aa25.83■■□□□ 1.73
PTP4A1-203ENST00000473334 PITPNM1O00562 1244 aa25.83■■□□□ 1.73
PTP4A1-203ENST00000473334 SCG2P13521 617 aa25.83■■□□□ 1.73
PTP4A1-203ENST00000473334 TOB2Q14106 344 aaPredicted RBP25.83■■□□□ 1.73
PTP4A1-203ENST00000473334 UBIAD1Q9Y5Z9 338 aa25.83■■□□□ 1.73
PTP4A1-203ENST00000473334 FOSP01100 380 aaPredicted RBP25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 ITGB5P18084 799 aa25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 PDIA3P30101 505 aaKnown RBP25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 BFSP2Q13515 415 aa25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 RASIP1Q5U651 963 aa25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 RPUSD2Q8IZ73 545 aaKnown RBP25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 GIMAP8Q8ND71 665 aaPredicted RBP25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 C16orf70Q9BSU1 422 aa25.82■■□□□ 1.72
PTP4A1-203ENST00000473334 SCN5AQ14524 2016 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 PRPF3O43395 683 aaKnown RBP25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 FGBP02675 491 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 LGALS2P05162 132 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 ZNF697Q5TEC3 545 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 CCDC155Q8N6L0 562 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 RETREG2Q8NC44 543 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 HERVK_113Q902F9 699 aa25.81■■□□□ 1.72
PTP4A1-203ENST00000473334 CTAGE1Q96RT6 745 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms