RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 STXBP3O00186 592 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 CAND2O75155 1236 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
SMURF1-203ENST00000472627 UPP2O95045 317 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 PDHBP11177 359 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 CTNNB1P35222 781 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 ZNF543Q08ER8 600 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 MBTPS1Q14703 1052 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 RRP12Q5JTH9 1297 aaKnown RBP16.33■□□□□ 0.2
SMURF1-203ENST00000472627 GPATCH4Q5T3I0 446 aaKnown RBP16.33■□□□□ 0.2
SMURF1-203ENST00000472627 TRAF7Q6Q0C0 670 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 FIBCD1Q8N539 461 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 APBB2Q92870 758 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 TOP1MTQ969P6 601 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
SMURF1-203ENST00000472627 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 ABCB11O95342 1321 aa16.33■□□□□ 0.2
SMURF1-203ENST00000472627 HAS3O00219 553 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 MBTPS2O43462 519 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 PPFIA4O75335 1185 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMURF1-203ENST00000472627 CLUL1Q15846 466 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 ZMYM1Q5SVZ6 1142 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 KCNV1Q6PIU1 500 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 WDFY4Q6ZS81 3184 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 MICAL3Q7RTP6 2002 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 SERINC5Q86VE9 423 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 IL17RAQ96F46 866 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
SMURF1-203ENST00000472627 DDX41Q9UJV9 622 aaKnown RBP16.32■□□□□ 0.2
SMURF1-203ENST00000472627 TMEM221A6NGB7 291 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 M0R296 226 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
SMURF1-203ENST00000472627 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 TSHZ3Q63HK5 1081 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 TRIM67Q6ZTA4 783 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 PRSS33Q8NF86 280 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 ATP6V0A1Q93050 837 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 TTC14Q96N46 770 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 CD207Q9UJ71 328 aa16.31■□□□□ 0.2
SMURF1-203ENST00000472627 C17orf102A2RUQ5 167 aa16.3■□□□□ 0.2
SMURF1-203ENST00000472627 GFRA3O60609 400 aa16.3■□□□□ 0.2
SMURF1-203ENST00000472627 SYTL5Q8TDW5 730 aaPredicted RBP16.3■□□□□ 0.2
SMURF1-203ENST00000472627 WNT8BQ93098 351 aa16.3■□□□□ 0.2
SMURF1-203ENST00000472627 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 GNAT1P11488 350 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
SMURF1-203ENST00000472627 LTBRP36941 435 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 NDUFV1P49821 464 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
SMURF1-203ENST00000472627 FBXL6Q8N531 539 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 PHOX2BQ99453 314 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
SMURF1-203ENST00000472627 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
SMURF1-203ENST00000472627 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
SMURF1-203ENST00000472627 FGRP09769 529 aa16.28■□□□□ 0.2
SMURF1-203ENST00000472627 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
SMURF1-203ENST00000472627 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
SMURF1-203ENST00000472627 HOXD8P13378 290 aaPredicted RBP16.28■□□□□ 0.2
SMURF1-203ENST00000472627 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
SMURF1-203ENST00000472627 ZNF200P98182 395 aaPredicted RBP16.28■□□□□ 0.2
SMURF1-203ENST00000472627 HYAL1Q12794 435 aa16.28■□□□□ 0.2
SMURF1-203ENST00000472627 IGFLR1Q9H665 355 aa16.28■□□□□ 0.2
SMURF1-203ENST00000472627 DHX16O60231 1041 aaKnown RBP16.27■□□□□ 0.2
SMURF1-203ENST00000472627 NR3C2P08235 984 aa16.27■□□□□ 0.2
SMURF1-203ENST00000472627 CTSHP09668 335 aa16.27■□□□□ 0.2
SMURF1-203ENST00000472627 BMPR1AP36894 532 aa16.27■□□□□ 0.2
SMURF1-203ENST00000472627 MIER1Q8N108 512 aa16.27■□□□□ 0.2
SMURF1-203ENST00000472627 ANKS1AQ92625 1134 aa16.27■□□□□ 0.2
SMURF1-203ENST00000472627 PLVAPQ9BX97 442 aa16.27■□□□□ 0.2
SMURF1-203ENST00000472627 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 KIAA1217Q5T5P2 1943 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 MMP1P03956 469 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 ALX1Q15699 326 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 CELF3Q5SZQ8 465 aaKnown RBP16.26■□□□□ 0.19
SMURF1-203ENST00000472627 IER5LQ5T953 404 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 ATOH1Q92858 354 aaPredicted RBP16.26■□□□□ 0.19
SMURF1-203ENST00000472627 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
SMURF1-203ENST00000472627 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 NLRC5Q86WI3 1866 aa16.26■□□□□ 0.19
SMURF1-203ENST00000472627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.25■□□□□ 0.19
SMURF1-203ENST00000472627 H3BRB1 525 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 NOP56O00567 594 aaKnown RBP16.25■□□□□ 0.19
SMURF1-203ENST00000472627 GRM6O15303 877 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 TBX10O75333 385 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 GGPS1O95749 300 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 TGFB3P10600 412 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 NT5C2P49902 561 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 ZXDAP98168 799 aa16.25■□□□□ 0.19
SMURF1-203ENST00000472627 DLX2Q07687 328 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms