RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NSUN7Q8NE18 718 aaKnown RBP16.22■□□□□ 0.19
BRCA1-211ENST00000472490 EMID1Q96A84 441 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-211ENST00000472490 VTI1AQ96AJ9 217 aa16.22■□□□□ 0.19
BRCA1-211ENST00000472490 SEZ6LQ9BYH1 1024 aa16.22■□□□□ 0.19
BRCA1-211ENST00000472490 LCTP09848 1927 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 MYADML2A6NDP7 307 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 A6NJR5 290 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 SPATA31C2B4DYI2 1134 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 CTAGE5O15320 804 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 BEX3Q00994 111 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 SLC39A5Q6ZMH5 540 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 CCDC83Q8IWF9 413 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 BLIDQ8IZY5 108 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 DAGLBQ8NCG7 672 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 FERMT2Q96AC1 680 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 MLXIPQ9HAP2 919 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 BRMS1Q9HCU9 246 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 TMEM260Q9NX78 707 aa16.21■□□□□ 0.19
BRCA1-211ENST00000472490 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
BRCA1-211ENST00000472490 ATN1P54259 1190 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-211ENST00000472490 ARHGAP4P98171 946 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 ARHGAP1Q07960 439 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 DGKDQ16760 1214 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
BRCA1-211ENST00000472490 PPTC7Q8NI37 304 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 COPS5Q92905 334 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 PGBD1Q96JS3 809 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 MXRA8Q9BRK3 442 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 UBIAD1Q9Y5Z9 338 aa16.2■□□□□ 0.18
BRCA1-211ENST00000472490 KIAA0100Q14667 2235 aaKnown RBP16.2■□□□□ 0.18
BRCA1-211ENST00000472490 MROH7Q68CQ1 1323 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 LRRC37A2A6NM11 1700 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-211ENST00000472490 GGPS1O95749 300 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 CYP3A4P08684 503 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 FDPSP14324 419 aaKnown RBP16.19■□□□□ 0.18
BRCA1-211ENST00000472490 ITGB5P18084 799 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 UBA1P22314 1058 aaKnown RBP16.19■□□□□ 0.18
BRCA1-211ENST00000472490 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 CEP55Q53EZ4 464 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 MYSM1Q5VVJ2 828 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 METTL7BQ6UX53 244 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 CXCL17Q6UXB2 119 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 NIPA1Q7RTP0 329 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 AFG1LQ8WV93 481 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-211ENST00000472490 SPATA33Q96N06 139 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
BRCA1-211ENST00000472490 NOP56O00567 594 aaKnown RBP16.18■□□□□ 0.18
BRCA1-211ENST00000472490 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 MYL3P08590 195 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 USP11P51784 963 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-211ENST00000472490 SETQ01105 290 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-211ENST00000472490 SNX17Q15036 470 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 KRT25Q7Z3Z0 450 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 TMX3Q96JJ7 454 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 MTG1Q9BT17 334 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-211ENST00000472490 PRKAG2Q9UGJ0 569 aa16.18■□□□□ 0.18
BRCA1-211ENST00000472490 CCDC194A0A1B0GVG4 234 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 JAK2O60674 1132 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 MMP3P08254 477 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 PTGS1P23219 599 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 RTP1P59025 263 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 PURAQ00577 322 aaKnown RBP16.17■□□□□ 0.18
BRCA1-211ENST00000472490 SP2Q02086 613 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 ST3GAL1Q11201 340 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRCA1-211ENST00000472490 SAFBQ15424 915 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRCA1-211ENST00000472490 RASGRP4Q8TDF6 673 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 SDF4Q9BRK5 362 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 KCNH7Q9NS40 1196 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 KCNJ14Q9UNX9 436 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 ATP11BQ9Y2G3 1177 aa16.17■□□□□ 0.18
BRCA1-211ENST00000472490 DCDC2CA8MYV0 355 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 M0R2N6 131 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 ARVCFO00192 962 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 MEIS1O00470 390 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 CIITAP33076 1130 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 KRT2P35908 639 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 SEMA3FQ13275 785 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 ITGA7Q13683 1181 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 HSDL1Q3SXM5 330 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 TRIM60Q495X7 471 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 ANKRD33Q7Z3H0 272 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 C7orf61Q8IZ16 206 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 TBCKQ8TEA7 893 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 TOX2Q96NM4 488 aa16.16■□□□□ 0.18
BRCA1-211ENST00000472490 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
BRCA1-211ENST00000472490 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms