RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 SPIRE1Q08AE8 756 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 MAP3K20Q9NYL2 800 aaKnown RBP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 BICDL2A1A5D9 508 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 E9PMD0 336 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 VWA5AO00534 786 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 HOXA7P31268 230 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 SETQ01105 290 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 CEP55Q53EZ4 464 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 C17orf53Q8N3J3 647 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.46■□□□□ 0.87
GCFC2-208ENST00000472230 ATG4CQ96DT6 458 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 TRIM47Q96LD4 638 aa20.46■□□□□ 0.87
GCFC2-208ENST00000472230 USP2O75604 605 aaPredicted RBP20.45■□□□□ 0.86
GCFC2-208ENST00000472230 PLA2G4BP0C869 781 aa20.45■□□□□ 0.86
GCFC2-208ENST00000472230 RPA1P27694 616 aa20.45■□□□□ 0.86
GCFC2-208ENST00000472230 LRCH2Q5VUJ6 765 aa20.45■□□□□ 0.86
GCFC2-208ENST00000472230 A0A1B0GTH6 734 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 PPP1R12BO60237 982 aaPredicted RBP20.44■□□□□ 0.86
GCFC2-208ENST00000472230 FCER1AP12319 257 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 STK4Q13043 487 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 KRT26Q7Z3Y9 468 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 CREBRFQ8IUR6 639 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 TRERF1Q96PN7 1200 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 INTS13Q9NVM9 706 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 VAV3Q9UKW4 847 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 TRIM49BA6NDI0 452 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 SKILP12757 684 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 MAP3K9P80192 1104 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 PSMD2Q13200 908 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 CATSPER3Q86XQ3 398 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 ZNF577Q9BSK1 485 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 SLC39A2Q9NP94 309 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 DNM3Q9UQ16 869 aa20.44■□□□□ 0.86
GCFC2-208ENST00000472230 POTEFA5A3E0 1075 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 ADM5C9JUS6 153 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 GAS7O60861 476 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 POTEIP0CG38 1075 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 CCNE1P24864 410 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 GHRHRQ02643 423 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 COG2Q14746 738 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 NR1I3Q14994 352 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 COBLL1Q53SF7 1204 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 DNTTIP2Q5QJE6 756 aaKnown RBP20.43■□□□□ 0.86
GCFC2-208ENST00000472230 POTEGQ6S5H5 508 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 POTEEQ6S8J3 1075 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 GPBP1Q86WP2 473 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 NOC3LQ8WTT2 800 aaKnown RBP20.43■□□□□ 0.86
GCFC2-208ENST00000472230 SLC5A5Q92911 643 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 P2RX5Q93086 422 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 MXRA8Q9BRK3 442 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 CSADQ9Y600 493 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 KCNJ18B7U540 433 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 OFD1O75665 1012 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 KRT18P05783 430 aaKnown RBP20.43■□□□□ 0.86
GCFC2-208ENST00000472230 DSG3P32926 999 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 KCNJ12Q14500 433 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 SPECC1LQ69YQ0 1117 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 MAGEC2Q9UBF1 373 aaPredicted RBP20.43■□□□□ 0.86
GCFC2-208ENST00000472230 LIMA1Q9UHB6 759 aaKnown RBP20.43■□□□□ 0.86
GCFC2-208ENST00000472230 AFG3L2Q9Y4W6 797 aa20.43■□□□□ 0.86
GCFC2-208ENST00000472230 RPTORQ8N122 1335 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 COL11A1P12107 1806 aaPredicted RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 MEIS1O00470 390 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 ARMCX5Q6P1M9 558 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 CCDC65Q8IXS2 484 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 ZFP91Q96JP5 570 aaPredicted RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 EIF2AK1Q9BQI3 630 aaKnown RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 POLR3CQ9BUI4 534 aaPredicted RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 THAP9Q9H5L6 903 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 SPTLC3Q9NUV7 552 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 PANK4Q9NVE7 773 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 COL20A1Q9P218 1284 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 PSMD10O75832 226 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 TCP11X2Q5H9J9 407 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 KIAA0895Q8NCT3 520 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 SYTL5Q8TDW5 730 aaPredicted RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 HPS3Q969F9 1004 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 TEKT3Q9BXF9 490 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 WDR11Q9BZH6 1224 aa20.42■□□□□ 0.86
GCFC2-208ENST00000472230 ADD3Q9UEY8 706 aaKnown RBP20.42■□□□□ 0.86
GCFC2-208ENST00000472230 CHMP2AO43633 222 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 IREB2P48200 963 aaKnown RBP20.41■□□□□ 0.86
GCFC2-208ENST00000472230 PMS1P54277 932 aaKnown RBP20.41■□□□□ 0.86
GCFC2-208ENST00000472230 OAZ1P54368 228 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 CCZ1BP86790 482 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 CCZ1P86791 482 aaPredicted RBP20.41■□□□□ 0.86
GCFC2-208ENST00000472230 PPP2R5CQ13362 524 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 VGLL4Q14135 290 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 KRT31Q15323 416 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 PTPN21Q16825 1174 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 NSMFQ6X4W1 530 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 CATSPERGQ6ZRH7 1159 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 OTOP1Q7RTM1 612 aa20.41■□□□□ 0.86
GCFC2-208ENST00000472230 SRRTQ9BXP5 876 aaKnown RBP20.41■□□□□ 0.86
GCFC2-208ENST00000472230 RNF146Q9NTX7 359 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms