RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 IL31RAQ8NI17 732 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 PHKBQ93100 1093 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
CLRN1-205ENST00000472224 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 PSTPIP2Q9H939 334 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 CPLX1O14810 134 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 DYNC1LI2O43237 492 aaPredicted RBP13.64□□□□□ -0.23
CLRN1-205ENST00000472224 NR3C2P08235 984 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 BMP1P13497 986 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 GHRHRQ02643 423 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 KCNA10Q16322 511 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 GNASQ5JWF2 1037 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 OR6J1Q8NGC5 347 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 SCFD2Q8WU76 684 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
CLRN1-205ENST00000472224 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 PDCD2LQ9BRP1 358 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 LRFN3Q9BTN0 628 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 PBX4Q9BYU1 374 aa13.64□□□□□ -0.23
CLRN1-205ENST00000472224 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
CLRN1-205ENST00000472224 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
CLRN1-205ENST00000472224 GNEQ9Y223 722 aaKnown RBP13.64□□□□□ -0.23
CLRN1-205ENST00000472224 A0A1W2PQ45 241 aaPredicted RBP13.63□□□□□ -0.23
CLRN1-205ENST00000472224 A0A1W2PQY0 241 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 STXBP3O00186 592 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 TXNP10599 105 aaKnown RBP13.63□□□□□ -0.23
CLRN1-205ENST00000472224 RAG1P15918 1043 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 CCND2P30279 289 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 ADCY7P51828 1080 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 ACLYP53396 1101 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 AK2P54819 239 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 GJA9P57773 515 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 PGM5Q15124 567 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 COPS5Q92905 334 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLRN1-205ENST00000472224 PHF24Q9UPV7 400 aa13.63□□□□□ -0.23
CLRN1-205ENST00000472224 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 MEIS2O14770 477 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 SORBS3O60504 671 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 ARIH2O95376 493 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 SCG2P13521 617 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 CST5P28325 142 aaPredicted RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 NEK4P51957 841 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 EVCP57679 992 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 FSCN1Q16658 493 aaKnown RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 DUSP28Q4G0W2 176 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 CPLX2Q6PUV4 134 aaKnown RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 C16orf59Q7L2K0 433 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 TRIM22Q8IYM9 498 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 KLHDC9Q8NEP7 349 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 ZNF274Q96GC6 653 aaPredicted RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 SLKQ9H2G2 1235 aaPredicted RBP13.62□□□□□ -0.23
CLRN1-205ENST00000472224 EPHX3Q9H6B9 360 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 STARD7Q9NQZ5 370 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 BARHL2Q9NY43 387 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 HCN4Q9Y3Q4 1203 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 MRVI1Q9Y6F6 885 aa13.62□□□□□ -0.23
CLRN1-205ENST00000472224 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 MOXD2PA6NHM9 499 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 PIK3CDO00329 1044 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 NKRFO15226 690 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 ZEB2O60315 1214 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 EIF3JO75822 258 aaKnown RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 ASGR1P07306 291 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 IFNAR1P17181 557 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 TFF2Q03403 129 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 FAAP100Q0VG06 881 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 LY6KQ17RY6 165 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 PGBD1Q96JS3 809 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 TSEN34Q9BSV6 310 aaKnown RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 C22orf23Q9BZE7 217 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 UPF2Q9HAU5 1272 aaKnown RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 CXXC1Q9P0U4 656 aaPredicted RBP13.61□□□□□ -0.23
CLRN1-205ENST00000472224 TPCN1Q9ULQ1 816 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 FRMPD4Q14CM0 1322 aa13.61□□□□□ -0.23
CLRN1-205ENST00000472224 SMCO2A6NFE2 343 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 CTAGE5O15320 804 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 PRPF3O43395 683 aaKnown RBP13.6□□□□□ -0.23
CLRN1-205ENST00000472224 MYL3P08590 195 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 PYGBP11216 843 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 IGFBP4P22692 258 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 KCNQ1P51787 676 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 SCRN1Q12765 414 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 MYO9BQ13459 2157 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms