RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PCDHB6Q9Y5E3 794 aa19.09■□□□□ 0.65
CCM2-205ENST00000472223 PTCH2Q9Y6C5 1203 aa19.09■□□□□ 0.65
CCM2-205ENST00000472223 KIAA1217Q5T5P2 1943 aa19.08■□□□□ 0.65
CCM2-205ENST00000472223 TBX3O15119 743 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 ITGB5P18084 799 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 CNGA1P29973 690 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 TOB1P50616 345 aaPredicted RBP19.08■□□□□ 0.64
CCM2-205ENST00000472223 CEBPZQ03701 1054 aaKnown RBP19.08■□□□□ 0.64
CCM2-205ENST00000472223 NEDD9Q14511 834 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 STK38Q15208 465 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 CSPP1Q1MSJ5 1256 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 FBXO46Q6PJ61 603 aaPredicted RBP19.08■□□□□ 0.64
CCM2-205ENST00000472223 FAM20AQ96MK3 541 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.08■□□□□ 0.64
CCM2-205ENST00000472223 KCNH7Q9NS40 1196 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 MYH15Q9Y2K3 1946 aa19.08■□□□□ 0.64
CCM2-205ENST00000472223 SPATA31C2B4DYI2 1134 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 TXNP10599 105 aaKnown RBP19.07■□□□□ 0.64
CCM2-205ENST00000472223 ICAM3P32942 547 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 DNM1Q05193 864 aaKnown RBP19.07■□□□□ 0.64
CCM2-205ENST00000472223 PTGDRQ13258 359 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 TMEM266Q2M3C6 531 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 CYP2W1Q8TAV3 490 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 MBOAT7Q96N66 472 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 RAB34Q9BZG1 259 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 SCAND2PQ9GZW5 306 aaPredicted RBP19.07■□□□□ 0.64
CCM2-205ENST00000472223 TBC1D22BQ9NU19 505 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 POLR3EQ9NVU0 708 aa19.07■□□□□ 0.64
CCM2-205ENST00000472223 TFIP11Q9UBB9 837 aaKnown RBP19.07■□□□□ 0.64
CCM2-205ENST00000472223 IGLV3-22A0A075B6J6 115 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 IPO5O00410 1097 aaKnown RBP19.06■□□□□ 0.64
CCM2-205ENST00000472223 NKRFO15226 690 aaKnown RBP eCLIP19.06■□□□□ 0.64
CCM2-205ENST00000472223 OR52Z1P0C646 297 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 PRKAR2AP13861 404 aaKnown RBP19.06■□□□□ 0.64
CCM2-205ENST00000472223 AKR1A1P14550 325 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 TNFAIP2Q03169 654 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 NBR1Q14596 966 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 PRAMEF19Q5SWL8 479 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 MLXIPQ9HAP2 919 aa19.06■□□□□ 0.64
CCM2-205ENST00000472223 DDX49Q9Y6V7 483 aaKnown RBP19.06■□□□□ 0.64
CCM2-205ENST00000472223 MSH4O15457 936 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 SLC37A4O43826 429 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 GAS7O60861 476 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 YEATS4O95619 227 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 INHAP05111 366 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 ARP10275 920 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 CACNB2Q08289 660 aaPredicted RBP19.05■□□□□ 0.64
CCM2-205ENST00000472223 CCDC144BQ3MJ40 725 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 LRCH2Q5VUJ6 765 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 DTHD1Q6ZMT9 781 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 DHX37Q8IY37 1157 aaKnown RBP19.05■□□□□ 0.64
CCM2-205ENST00000472223 TNPO1Q92973 898 aaKnown RBP19.05■□□□□ 0.64
CCM2-205ENST00000472223 SPATA32Q96LK8 384 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 GBP4Q96PP9 640 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 USP28Q96RU2 1077 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 RIT2Q99578 217 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 SENP7Q9BQF6 1050 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 TEKT3Q9BXF9 490 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 SPC25Q9HBM1 224 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 AGO4Q9HCK5 861 aaKnown RBP19.05■□□□□ 0.64
CCM2-205ENST00000472223 HMX1Q9NP08 348 aaPredicted RBP19.05■□□□□ 0.64
CCM2-205ENST00000472223 PKD2L1Q9P0L9 805 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 PCDHA12Q9UN75 941 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 CLIC4Q9Y696 253 aa19.05■□□□□ 0.64
CCM2-205ENST00000472223 RBM47A0AV96 593 aaKnown RBP19.04■□□□□ 0.64
CCM2-205ENST00000472223 PRPHP41219 470 aa19.04■□□□□ 0.64
CCM2-205ENST00000472223 TXKP42681 527 aa19.04■□□□□ 0.64
CCM2-205ENST00000472223 BRDTQ58F21 947 aaPredicted RBP19.04■□□□□ 0.64
CCM2-205ENST00000472223 ARL6IP4Q66PJ3 421 aaKnown RBP19.04■□□□□ 0.64
CCM2-205ENST00000472223 TAPT1Q6NXT6 567 aa19.04■□□□□ 0.64
CCM2-205ENST00000472223 KCNG4Q8TDN1 519 aa19.04■□□□□ 0.64
CCM2-205ENST00000472223 AP5M1Q9H0R1 490 aa19.04■□□□□ 0.64
CCM2-205ENST00000472223 PDGFCQ9NRA1 345 aa19.04■□□□□ 0.64
CCM2-205ENST00000472223 DDX41Q9UJV9 622 aaKnown RBP19.04■□□□□ 0.64
CCM2-205ENST00000472223 SPTLC2O15270 562 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 EDIL3O43854 480 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 MSCO60682 206 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 RGS20O76081 388 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 GH1P01241 217 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 ZNF865P0CJ78 1059 aaPredicted RBP19.03■□□□□ 0.64
CCM2-205ENST00000472223 ADCYAP1R1P41586 468 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 NASPP49321 788 aaPredicted RBP19.03■□□□□ 0.64
CCM2-205ENST00000472223 ATP2C1P98194 919 aaPredicted RBP19.03■□□□□ 0.64
CCM2-205ENST00000472223 SLC39A14Q15043 492 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 FERMT2Q96AC1 680 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 KATNBL1Q9H079 304 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 TTC12Q9H892 705 aaPredicted RBP19.03■□□□□ 0.64
CCM2-205ENST00000472223 LRRC37A2A6NM11 1700 aa19.03■□□□□ 0.64
CCM2-205ENST00000472223 NFASCO94856 1347 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 GOLGA6L4A6NEF3 574 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 NOP56O00567 594 aaKnown RBP19.02■□□□□ 0.64
CCM2-205ENST00000472223 SEPT4O43236 478 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 IGHA2P01877 340 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 RARBP10826 455 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 CYBAP13498 195 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 KRT76Q01546 638 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 LAMC2Q13753 1193 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 LY6KQ17RY6 165 aa19.02■□□□□ 0.64
CCM2-205ENST00000472223 DUSP28Q4G0W2 176 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms