RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TANC1Q9C0D5 1861 aa10.7□□□□□ -0.7
CPSF4-211ENST00000471455 A6NJR5 290 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 TXNP10599 105 aaKnown RBP10.69□□□□□ -0.7
CPSF4-211ENST00000471455 PDHBP11177 359 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 PTGS1P23219 599 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 EDNRBP24530 442 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
CPSF4-211ENST00000471455 RPS6P62753 249 aaKnown RBP10.69□□□□□ -0.7
CPSF4-211ENST00000471455 CCDC178Q5BJE1 867 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 RASGRP2Q7LDG7 609 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 HERC6Q8IVU3 1022 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 AFAP1L1Q8TED9 768 aa10.69□□□□□ -0.7
CPSF4-211ENST00000471455 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
CPSF4-211ENST00000471455 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
CPSF4-211ENST00000471455 PRRC2BQ5JSZ5 2229 aaKnown RBP10.69□□□□□ -0.7
CPSF4-211ENST00000471455 FOXP2O15409 715 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 EFCAB14O75071 495 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 MYOGP15173 224 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 MCMDC2Q4G0Z9 681 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 MFSD6Q6ZSS7 791 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 OTUD7AQ8TE49 926 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-211ENST00000471455 CLEC4DQ8WXI8 215 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 ESR2Q92731 530 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 KATNAL1Q9BW62 490 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 MTCH2Q9Y6C9 303 aa10.68□□□□□ -0.7
CPSF4-211ENST00000471455 ABCB11O95342 1321 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 TLL1O43897 1013 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 GH1P01241 217 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 FGAP02671 866 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 CFHP08603 1231 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 BMP1P13497 986 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 CASTP20810 708 aaKnown RBP10.67□□□□□ -0.7
CPSF4-211ENST00000471455 PLA2G5P39877 138 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 PTGISQ16647 500 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 TMEM63BQ5T3F8 832 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 VPS53Q5VIR6 699 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 SESTD1Q86VW0 696 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 MCF2L2Q86YR7 1114 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 NSUN6Q8TEA1 469 aaKnown RBP10.67□□□□□ -0.7
CPSF4-211ENST00000471455 ARNTL2Q8WYA1 636 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 ZNF516Q92618 1163 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 INCENPQ9NQS7 918 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-211ENST00000471455 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
CPSF4-211ENST00000471455 CCDC171Q6TFL3 1326 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 SALL3Q9BXA9 1300 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 CHD9Q3L8U1 2897 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 SNHG28P0DPA3 235 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 SELPP16109 830 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 CHMP4BP1P59074 171 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 TFF2Q03403 129 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 TAP1Q03518 808 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 DGKDQ16760 1214 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 USH1GQ495M9 461 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 CNKSR3Q6P9H4 555 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 LRRC8DQ7L1W4 858 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 IQCA1Q86XH1 822 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 DGKHQ86XP1 1220 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 HLA-CQ95604 372 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 VWCEQ96DN2 955 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 IWS1Q96ST2 819 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 CERS4Q9HA82 394 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 LMCD1Q9NZU5 365 aa10.66□□□□□ -0.7
CPSF4-211ENST00000471455 MMP3P08254 477 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 HSPD1P10809 573 aaKnown RBP10.65□□□□□ -0.7
CPSF4-211ENST00000471455 KCNC4Q03721 635 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 RBL2Q08999 1139 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 STXBP2Q15833 593 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 CDC37Q16543 378 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-211ENST00000471455 ASPRV1Q53RT3 343 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 C7orf31Q8N865 590 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 AFG1LQ8WV93 481 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 COPS5Q92905 334 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 KAT14Q9H8E8 782 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
CPSF4-211ENST00000471455 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.7
CPSF4-211ENST00000471455 SCN5AQ14524 2016 aa10.65□□□□□ -0.71
CPSF4-211ENST00000471455 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 EMSYQ7Z589 1322 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 A0A0D9SFI3 127 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 DHX16O60231 1041 aaKnown RBP10.64□□□□□ -0.71
CPSF4-211ENST00000471455 KCNQ1P51787 676 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 PDE1AP54750 535 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 HAND2P61296 217 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 WDR5P61964 334 aaKnown RBP10.64□□□□□ -0.71
CPSF4-211ENST00000471455 GRB10Q13322 594 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 LAMC2Q13753 1193 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 ARHGEF16Q5VV41 709 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 CCDC62Q6P9F0 684 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 SEPT14Q6ZU15 432 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
CPSF4-211ENST00000471455 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms