RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRE-207ENST00000471218 KCTD17Q8N5Z5 321 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 SHCBP1Q8NEM2 672 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 RAB34Q9BZG1 259 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 MROH8Q9H579 483 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 VAT1LQ9HCJ6 419 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 PPP1R9AQ9ULJ8 1098 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 DNAH12Q6ZR08 3092 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 NEMFO60524 1076 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 PFKFB1P16118 471 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 VCAM1P19320 739 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 SLC16A2P36021 539 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 PTGDRQ13258 359 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 CCL14Q16627 93 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 SHROOM1Q2M3G4 852 aaPredicted RBP10.35□□□□□ -0.75
PTPRE-207ENST00000471218 TKFCQ3LXA3 575 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 EARS2Q5JPH6 523 aaKnown RBP10.35□□□□□ -0.75
PTPRE-207ENST00000471218 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 Q7L0L9 218 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 SYMPKQ92797 1274 aaKnown RBP10.35□□□□□ -0.75
PTPRE-207ENST00000471218 MBOAT7Q96N66 472 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 GTPBP4Q9BZE4 634 aaKnown RBP10.35□□□□□ -0.75
PTPRE-207ENST00000471218 GZF1Q9H116 711 aaPredicted RBP10.35□□□□□ -0.75
PTPRE-207ENST00000471218 CUEDC2Q9H467 287 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 TSPY26PQ9H489 355 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 SLC38A10Q9HBR0 1119 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 ATAD5Q96QE3 1844 aa10.35□□□□□ -0.75
PTPRE-207ENST00000471218 SYCE3A1L190 88 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 SEPT4O43236 478 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 ZNF202O95125 648 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 SLC25A27O95847 323 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 CYP3A4P08684 503 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 OR52Z1P0C646 297 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 CIITAP33076 1130 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 COPB2P35606 906 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 SREBF1P36956 1147 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRE-207ENST00000471218 NDUFA8P51970 172 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 SMAD3P84022 425 aaKnown RBP10.34□□□□□ -0.75
PTPRE-207ENST00000471218 PDIA5Q14554 519 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 CT47A1Q5JQC4 288 aaPredicted RBP10.34□□□□□ -0.75
PTPRE-207ENST00000471218 SHC4Q6S5L8 630 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 DTHD1Q6ZMT9 781 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 C4orf32Q8N8J7 132 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 TBCKQ8TEA7 893 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 CRYGNQ8WXF5 182 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 FUCA2Q9BTY2 467 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 RPAP3Q9H6T3 665 aaPredicted RBP10.34□□□□□ -0.75
PTPRE-207ENST00000471218 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 LAMA2P24043 3122 aaKnown RBP10.34□□□□□ -0.75
PTPRE-207ENST00000471218 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
PTPRE-207ENST00000471218 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 GCOM1H8Y6P7 765 aaPredicted RBP10.33□□□□□ -0.76
PTPRE-207ENST00000471218 MEIS2O14770 477 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 RAD21O60216 631 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 ZBED4O75132 1171 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 SLFN14P0C7P3 912 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 POLR2MP0CAP2 368 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 MARCKSP29966 332 aaPredicted RBP10.33□□□□□ -0.76
PTPRE-207ENST00000471218 RTP1P59025 263 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 ZYXQ15942 572 aaKnown RBP10.33□□□□□ -0.76
PTPRE-207ENST00000471218 INF2Q27J81 1249 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 TMEM266Q2M3C6 531 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 KIAA1755Q5JYT7 1200 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 XRRA1Q6P2D8 792 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 SLC39A5Q6ZMH5 540 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 SLFN12Q8IYM2 578 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 SPICE1Q8N0Z3 855 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 IQUBQ8NA54 791 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 NUP88Q99567 741 aaPredicted RBP10.33□□□□□ -0.76
PTPRE-207ENST00000471218 SDF4Q9BRK5 362 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 GRPEL1Q9HAV7 217 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 ALPK3Q96L96 1907 aa10.33□□□□□ -0.76
PTPRE-207ENST00000471218 BAZ2BQ9UIF8 2168 aaKnown RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 FAM205CA6NFA0 338 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 SPDYE16A6NNV3 312 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 CCNT1O60563 726 aaKnown RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 CNMDO75829 334 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 FCER1AP12319 257 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 CYBAP13498 195 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ADORA2AP29274 412 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 MCM7P33993 719 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 HSD17B4P51659 736 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ATN1P54259 1190 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
PTPRE-207ENST00000471218 ZNF174Q15697 407 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 STX1AQ16623 288 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 Q4G0T1 1027 aa10.32□□□□□ -0.76
PTPRE-207ENST00000471218 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms