RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 LARGE1O95461 756 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 SCRN1Q12765 414 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 ANKRD33Q7Z3H0 272 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 VTI1AQ96AJ9 217 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 TRIM43Q96BQ3 446 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 TMEM260Q9NX78 707 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 DDX41Q9UJV9 622 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.36
DNMT3A-209ENST00000470983 A0A0C4DFX4 3053 aa17.27■□□□□ 0.35
DNMT3A-209ENST00000470983 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
DNMT3A-209ENST00000470983 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
DNMT3A-209ENST00000470983 SLKQ9H2G2 1235 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-209ENST00000470983 VPS54Q9P1Q0 977 aa17.26■□□□□ 0.35
DNMT3A-209ENST00000470983 PFKFB2O60825 505 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 PQBP1O60828 265 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 GH1P01241 217 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 MYL3P08590 195 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 PSMC6P62333 389 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 SSRP1Q08945 709 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 PCNX4Q63HM2 1172 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 AFG1LQ8WV93 481 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 KIF2CQ99661 725 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
DNMT3A-209ENST00000470983 ELP1O95163 1332 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 SCN10AQ9Y5Y9 1956 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 A0A0U1RQG5 324 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 ZEB2O60315 1214 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 UBA1P22314 1058 aaKnown RBP17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 CPT1AP50416 773 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 SP2Q02086 613 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 ME3Q16798 604 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 CPLX2Q6PUV4 134 aaKnown RBP17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 TRIM22Q8IYM9 498 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 PPP1R13LQ8WUF5 828 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 AIFM3Q96NN9 605 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 INPP4AQ96PE3 977 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 ANO3Q9BYT9 981 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 BCAS3Q9H6U6 928 aa17.24■□□□□ 0.35
DNMT3A-209ENST00000470983 ESYT2A0FGR8 921 aa17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 A6NJR5 290 aa17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 GGPS1O95749 300 aa17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 CLK2P49760 499 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 PURAQ00577 322 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 PPIGQ13427 754 aaKnown RBP eCLIP17.23■□□□□ 0.352e-8■■□□□ 14.5
DNMT3A-209ENST00000470983 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 MTIF3Q9H2K0 278 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
DNMT3A-209ENST00000470983 GRIN2DO15399 1336 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 ARVCFO00192 962 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 TLR3O15455 904 aaKnown RBP17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 CABYRO75952 493 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 TIMP1P01033 207 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 MMP3P08254 477 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 XRRA1Q6P2D8 792 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 SEZ6LQ9BYH1 1024 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 ZMYND12Q9H0C1 365 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 TTYH1Q9H313 450 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 EHMT1Q9H9B1 1298 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
DNMT3A-209ENST00000470983 SPATA31C2B4DYI2 1134 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 FIBPO43427 364 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 STAM2O75886 525 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 DEXIO95424 95 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 ITGB5P18084 799 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 DNAJB2P25686 324 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 ICAM3P32942 547 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 RBM25P49756 843 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 CDK7P50613 346 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 ITGA7Q13683 1181 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 CELF3Q5SZQ8 465 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 MFSD5Q6N075 450 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 KCNV1Q6PIU1 500 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 CCDC148Q8NFR7 591 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 GAS2L1Q99501 681 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 MTG1Q9BT17 334 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 GLT8D2Q9H1C3 349 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 PRDM6Q9NQX0 595 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 PKD2L1Q9P0L9 805 aa17.21■□□□□ 0.35
DNMT3A-209ENST00000470983 UBIAD1Q9Y5Z9 338 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms