RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 GJA3Q9Y6H8 435 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 BMP6P22004 513 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 PLS1Q14651 629 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 CCDC122Q5T0U0 273 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 TUBGCP2Q9BSJ2 902 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 AMNQ9BXJ7 453 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 ZCCHC17Q9NP64 241 aaKnown RBP18.21■□□□□ 0.51
HOXB3-205ENST00000470495 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.51
HOXB3-205ENST00000470495 HOMER2Q9NSB8 354 aa18.21■□□□□ 0.51
HOXB3-205ENST00000470495 GPBP1Q86WP2 473 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 DDX39AO00148 427 aaKnown RBP18.2■□□□□ 0.5
HOXB3-205ENST00000470495 ZBTB5O15062 677 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 USO1O60763 962 aaKnown RBP18.2■□□□□ 0.5
HOXB3-205ENST00000470495 CNOT6LQ96LI5 555 aaKnown RBP18.2■□□□□ 0.5
HOXB3-205ENST00000470495 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 KIF9Q9HAQ2 790 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 ITGB4P16144 1822 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 TJP1Q07157 1748 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 MACROD2A1Z1Q3 448 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 PPP2R3AQ06190 1150 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 WHAMMP3Q1A5X7 153 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 TCP11X2Q5H9J9 407 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 NIM1KQ8IY84 436 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 GLT8D2Q9H1C3 349 aa18.2■□□□□ 0.5
HOXB3-205ENST00000470495 MORC2Q9Y6X9 1032 aaPredicted RBP18.2■□□□□ 0.5
HOXB3-205ENST00000470495 PRPF4BQ13523 1007 aaKnown RBP18.19■□□□□ 0.5
HOXB3-205ENST00000470495 TRIM14Q14142 442 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 TNIP1Q15025 636 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 C16orf87Q6PH81 154 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 P2RX5Q93086 422 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 CAPZA3Q96KX2 299 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 SMIM24O75264 130 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 SKAP2O75563 359 aaPredicted RBP18.19■□□□□ 0.5
HOXB3-205ENST00000470495 SH3BGRP55822 239 aaPredicted RBP18.19■□□□□ 0.5
HOXB3-205ENST00000470495 ZNF543Q08ER8 600 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 MTF1Q14872 753 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 SYCP1Q15431 976 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 HAUS3Q68CZ6 603 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 TMCO5AQ8N6Q1 288 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 ZMYND12Q9H0C1 365 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 MEIS1O00470 390 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 RHBDL3P58872 404 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 QRICH1Q2TAL8 776 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 OR8K1Q8NGG5 319 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
HOXB3-205ENST00000470495 LUC7LQ9NQ29 371 aaKnown RBP18.19■□□□□ 0.5
HOXB3-205ENST00000470495 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
HOXB3-205ENST00000470495 A0A087WUV0 522 aaPredicted RBP18.19■□□□□ 0.5
HOXB3-205ENST00000470495 NUP188Q5SRE5 1749 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 AHDC1Q5TGY3 1603 aaPredicted RBP18.18■□□□□ 0.5
HOXB3-205ENST00000470495 FCER1AP12319 257 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 BMP3P12645 472 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 FGRP09769 529 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 MAEAQ7L5Y9 396 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 GBP3Q9H0R5 595 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 DNM3Q9UQ16 869 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 F5H6K3 240 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 MATR3P43243 847 aaKnown RBP eCLIP18.18■□□□□ 0.5
HOXB3-205ENST00000470495 KLRC3Q07444 240 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 DCAF17Q5H9S7 520 aaPredicted RBP18.18■□□□□ 0.5
HOXB3-205ENST00000470495 SYCP3Q8IZU3 236 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 PANK4Q9NVE7 773 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 SUGT1Q9Y2Z0 365 aa18.18■□□□□ 0.5
HOXB3-205ENST00000470495 PPP1R12BO60237 982 aaPredicted RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 HOXA10P31260 410 aaPredicted RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 PPP1R2P41236 205 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 CRY2Q49AN0 593 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 TADA2BQ86TJ2 420 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 SPAG5Q96R06 1193 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 NAA15Q9BXJ9 866 aaKnown RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 POLD4Q9HCU8 107 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 NLRC4Q9NPP4 1024 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 FAM13AO94988 1023 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 RHOXF2BP0C7M4 288 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 KRT83P78385 493 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 KIF5AQ12840 1032 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 PABPC4Q13310 644 aaKnown RBP eCLIP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 CERS5Q8N5B7 392 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 RHOXF2Q9BQY4 288 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 XIRP1Q702N8 1843 aaKnown RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 DNM2P50570 870 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
HOXB3-205ENST00000470495 GNPTABQ3T906 1256 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 ANO3Q9BYT9 981 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 NT5C3AQ9H0P0 336 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 JMJD4Q9H9V9 463 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 PCDHAC2Q9Y5I4 1007 aa18.17■□□□□ 0.5
HOXB3-205ENST00000470495 KRT86O43790 486 aa18.16■□□□□ 0.5
HOXB3-205ENST00000470495 SESN3P58005 492 aa18.16■□□□□ 0.5
HOXB3-205ENST00000470495 TMEM179Q6ZVK1 233 aa18.16■□□□□ 0.5
HOXB3-205ENST00000470495 TPH2Q8IWU9 490 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms