RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CLEC17AQ6ZS10 378 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 BRAPQ7Z569 592 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 RAB11FIP4Q86YS3 637 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 SCYL3Q8IZE3 742 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 LRRC47Q8N1G4 583 aaKnown RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 FBXO18Q8NFZ0 1043 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 CCDC12Q8WUD4 166 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 LPAR1Q92633 364 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 RRP36Q96EU6 259 aaKnown RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 WNK4Q96J92 1243 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 ALG1Q9BT22 464 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 PRO3102Q9H379 93 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 EFCC1Q9HA90 598 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 BRMS1Q9HCU9 246 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 SH3GLB2Q9NR46 395 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 SEC63Q9UGP8 760 aaKnown RBP7.63□□□□□ -1.19
VAMP3-202ENST00000470357 MAD2L2Q9UI95 211 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 TMX2Q9Y320 296 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 CSADQ9Y600 493 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 PHIPQ8WWQ0 1821 aa7.63□□□□□ -1.19
VAMP3-202ENST00000470357 OTOFQ9HC10 1997 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 CNTNAP5Q8WYK1 1306 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 C19orf81C9J6K1 198 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 F5H6K3 240 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 PLA2G6O60733 806 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 F13A1P00488 732 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 BMP3P12645 472 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 SCG2P13521 617 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 FDPSP14324 419 aaKnown RBP7.62□□□□□ -1.19
VAMP3-202ENST00000470357 CALML3P27482 149 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 GUCY1A2P33402 732 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 SLC1A4P43007 532 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 KLRC3Q07444 240 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 GNL2Q13823 731 aaKnown RBP7.62□□□□□ -1.19
VAMP3-202ENST00000470357 PFKFB3Q16875 520 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-202ENST00000470357 CCDC96Q2M329 555 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 GALNT17Q6IS24 598 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 TMEM214Q6NUQ4 689 aaKnown RBP7.62□□□□□ -1.19
VAMP3-202ENST00000470357 TEX2Q8IWB9 1127 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 CCDC148Q8NFR7 591 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 CHURC1Q8WUH1 139 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 TNPO1Q92973 898 aaKnown RBP7.62□□□□□ -1.19
VAMP3-202ENST00000470357 IRF7Q92985 503 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 PHKBQ93100 1093 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 ERO1AQ96HE7 468 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 WRNIP1Q96S55 665 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 FEZ1Q99689 392 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 WDR18Q9BV38 432 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 KIAA1683Q9H0B3 1180 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 VCPKMTQ9H867 229 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 PNMA2Q9UL42 364 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 MTMR6Q9Y217 621 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 MAFBQ9Y5Q3 323 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-202ENST00000470357 PTPRFP10586 1907 aa7.62□□□□□ -1.19
VAMP3-202ENST00000470357 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 USP17L10C9JJH3 530 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 DLL1O00548 723 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 PLEKHA8P1O95397 391 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 NDUFB10O96000 172 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 PHKA2P46019 1235 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 SP3Q02447 781 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 TLR1Q15399 786 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 FAM160B2Q86V87 743 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 TRIM50Q86XT4 487 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 SIAH1Q8IUQ4 282 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 ANKRD13AQ8IZ07 590 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 SRBD1Q8N5C6 995 aaKnown RBP7.61□□□□□ -1.19
VAMP3-202ENST00000470357 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.61□□□□□ -1.19
VAMP3-202ENST00000470357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.61□□□□□ -1.19
VAMP3-202ENST00000470357 GLT8D2Q9H1C3 349 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 RIOX1Q9H6W3 641 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 ISY1Q9ULR0 285 aaKnown RBP7.61□□□□□ -1.19
VAMP3-202ENST00000470357 MTMR7Q9Y216 660 aa7.61□□□□□ -1.19
VAMP3-202ENST00000470357 PNMA6FA0A0J9YX94 578 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 WDR46O15213 610 aaKnown RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 USP2O75604 605 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 MMP1P03956 469 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 INPP5BP32019 993 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 STAT2P52630 851 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 SMTNP53814 917 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 CLDN10P78369 228 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 KRT85P78386 507 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 IKQ13123 557 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 PKP1Q13835 747 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 RRP1BQ14684 758 aaKnown RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 KRT40Q6A162 431 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 MCTP2Q6DN12 878 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 MCTP1Q6DN14 999 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 BTNL9Q6UXG8 535 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 CLEC10AQ8IUN9 316 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 VWA5B2Q8N398 1253 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 CCDC82Q8N4S0 544 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF280CQ8ND82 737 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 BICD2Q8TD16 824 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF396Q96N95 335 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 GAS2L1Q99501 681 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 SCAND2PQ9GZW5 306 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms