RNA–Protein interactions for RNA: ENST00000470352.1

RPN2-208, Transcript of ribophorin II, human

TSL 2

Gene RPN2, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPN2-208	ENST00000470352	GPRASP2	Q96D09	838 aa		13.86	□□□□□ -0.19
RPN2-208	ENST00000470352	CDHR1	Q96JP9	859 aa		13.86	□□□□□ -0.19
RPN2-208	ENST00000470352	ANO3	Q9BYT9	981 aa		13.86	□□□□□ -0.19
RPN2-208	ENST00000470352	VPS54	Q9P1Q0	977 aa		13.86	□□□□□ -0.19
RPN2-208	ENST00000470352	PRKAG2	Q9UGJ0	569 aa		13.86	□□□□□ -0.19
RPN2-208	ENST00000470352	GGPS1	O95749	300 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	MYL3	P08590	195 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	SREBF1	P36956	1147 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	ME3	Q16798	604 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	CELF3	Q5SZQ8	465 aa	Known RBP	13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	IL27	Q8NEV9	243 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	AFG1L	Q8WV93	481 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	ZFP91	Q96JP5	570 aa	Predicted RBP	13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	TOX2	Q96NM4	488 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	KIF2C	Q99661	725 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	MTG1	Q9BT17	334 aa	Predicted RBP	13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	RTEL1	Q9NZ71	1219 aa		13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.85	□□□□□ -0.19
RPN2-208	ENST00000470352	DCDC2C	A8MYV0	355 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	SPATA31C2	B4DYI2	1134 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	ARVCF	O00192	962 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	PQBP1	O60828	265 aa	Known RBP	13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	LARGE1	O95461	756 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	CLTB	P09497	229 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	XBP1	P17861	261 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	NLRP5	P59047	1200 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	TLE2	Q04725	743 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	SEMA3F	Q13275	785 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	MTMR1	Q13613	665 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	NEDD9	Q14511	834 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	RABEP1	Q15276	862 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	DGKD	Q16760	1214 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	MYSM1	Q5VVJ2	828 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	SENP7	Q9BQF6	1050 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	PDLIM7	Q9NR12	457 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	UBIAD1	Q9Y5Z9	338 aa		13.84	□□□□□ -0.19
RPN2-208	ENST00000470352	DNAH12	Q6ZR08	3092 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	TLR3	O15455	904 aa	Known RBP	13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	MAFG	O15525	162 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	SYN1	P17600	705 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	ITGB5	P18084	799 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	CDK7	P50613	346 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	SP2	Q02086	613 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	ITGA7	Q13683	1181 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	JAKMIP3	Q5VZ66	844 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	GALNT17	Q6IS24	598 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	METTL7B	Q6UX53	244 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	SLC43A3	Q8NBI5	491 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	WASF1	Q92558	559 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	PGBD1	Q96JS3	809 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	SPATA33	Q96N06	139 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	MLXIP	Q9HAP2	919 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	TMEM260	Q9NX78	707 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	LIMCH1	Q9UPQ0	1083 aa		13.83	□□□□□ -0.2
RPN2-208	ENST00000470352	SCN10A	Q9Y5Y9	1956 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	CTDNEP1	O95476	244 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	HOXD8	P13378	290 aa	Predicted RBP	13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	PSMC6	P62333	389 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	ARHGAP4	P98171	946 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	CEP55	Q53EZ4	464 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	FAM126B	Q8IXS8	530 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	NECAB1	Q8N987	351 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	DAGLB	Q8NCG7	672 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	TBC1D32	Q96NH3	1257 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	KATNAL1	Q9BW62	490 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	JADE2	Q9NQC1	790 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	ORC3	Q9UBD5	711 aa	Predicted RBP	13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	LTBP2	Q14767	1821 aa		13.82	□□□□□ -0.2
RPN2-208	ENST00000470352	NOP56	O00567	594 aa	Known RBP	13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	ST18	O60284	1047 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	CYP3A4	P08684	503 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	FAAP100	Q0VG06	881 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	HSDL1	Q3SXM5	330 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	NFRKB	Q6P4R8	1299 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	CHRDL2	Q6WN34	429 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	CYFIP1	Q7L576	1253 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	NIPA1	Q7RTP0	329 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	NSUN7	Q8NE18	718 aa	Known RBP	13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	CRYGN	Q8WXF5	182 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	AIFM3	Q96NN9	605 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	MXRA8	Q9BRK3	442 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	TMEM39A	Q9NV64	488 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	PCDHA4	Q9UN74	947 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	GRIN2D	O15399	1336 aa		13.81	□□□□□ -0.2
RPN2-208	ENST00000470352	KIAA0355	O15063	1070 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	SORBS3	O60504	671 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	PPFIA4	O75335	1185 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	F2	P00734	622 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	CD4	P01730	458 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	KCNA2	P16389	499 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	ZNF76	P36508	570 aa		13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	MAGEA10	P43363	369 aa	Predicted RBP	13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	SET	Q01105	290 aa	Predicted RBP	13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	PTPN11	Q06124	597 aa	Predicted RBP	13.8	□□□□□ -0.2
RPN2-208	ENST00000470352	NBPF20	Q3BBV1	942 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 107 ms