RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ADCYAP1R1P41586 468 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 GJA9P57773 515 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 Q4G0T1 1027 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 PIK3AP1Q6ZUJ8 805 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 PCSK9Q8NBP7 692 aaKnown RBP14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 XPNPEP3Q9NQH7 507 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 KCNH7Q9NS40 1196 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 TBC1D22BQ9NU19 505 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 CPT1AP50416 773 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 GUCY1B3Q02153 619 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 NR5A1Q13285 461 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 INF2Q27J81 1249 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 RILPL1Q5EBL4 403 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 DHX37Q8IY37 1157 aaKnown RBP14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 SEZ6LQ9BYH1 1024 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 LCTP09848 1927 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 NFASCO94856 1347 aa14.34□□□□□ -0.11
SPTLC1-204ENST00000469778 HTTP42858 3142 aa14.33□□□□□ -0.11
SPTLC1-204ENST00000469778 IGLV3-22A0A075B6J6 115 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 A6NJR5 290 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 FAM86B1E9PN63 330 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 DNM1LO00429 736 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 ADAMTS3O15072 1205 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 STX6O43752 255 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 FAM86B2P0C5J1 330 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 CELF3Q5SZQ8 465 aaKnown RBP14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 MCTP1Q6DN14 999 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 TLK2Q86UE8 772 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 PLA2G4DQ86XP0 818 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 PGBD1Q96JS3 809 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 RIT2Q99578 217 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 SDF4Q9BRK5 362 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 MLXIPQ9HAP2 919 aa14.33□□□□□ -0.12
SPTLC1-204ENST00000469778 MOXD2PA6NHM9 499 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 IPO5O00410 1097 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 DYNC1LI2O43237 492 aaPredicted RBP14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 DTNBO60941 627 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 CABYRO75952 493 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 BAG4O95429 457 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 FSCN1Q16658 493 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 LETM2Q2VYF4 491 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 PRR16Q569H4 304 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 SLFN12Q8IYM2 578 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 KLHDC9Q8NEP7 349 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 DDX25Q9UHL0 483 aaKnown RBP14.32□□□□□ -0.12
SPTLC1-204ENST00000469778 VPS37CA5D8V6 355 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 CCDC85CA6NKD9 419 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 KBTBD13C9JR72 458 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 LAD1O00515 517 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 CCNT1O60563 726 aaKnown RBP14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 MYCP01106 439 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 C6orf222P0C671 652 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 KCNA2P16389 499 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 FOSBP53539 338 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 ARHGAP1Q07960 439 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 LENG9Q96B70 501 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 ZNF577Q9BSK1 485 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 POLR3EQ9NVU0 708 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 TCEAL9Q9UHQ7 104 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
SPTLC1-204ENST00000469778 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 EDIL3O43854 480 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 ARIH2O95376 493 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 GGPS1O95749 300 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 BMP15O95972 392 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 HOXD8P13378 290 aaPredicted RBP14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 UBA1P22314 1058 aaKnown RBP14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 KRT76Q01546 638 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 LRRC41Q15345 812 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 DGKDQ16760 1214 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 SMAP1Q8IYB5 467 aaPredicted RBP14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 RDM1Q8NG50 284 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 SLC5A5Q92911 643 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 TNPO1Q92973 898 aaKnown RBP14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 SPATA33Q96N06 139 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 JPH1Q9HDC5 661 aaPredicted RBP14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 MTMR6Q9Y217 621 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 MCM3APO60318 1980 aa14.3□□□□□ -0.12
SPTLC1-204ENST00000469778 KIAA1217Q5T5P2 1943 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms