RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 PCDHB6Q9Y5E3 794 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 A6NJR5 290 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 CDC25AP30304 524 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 GBP1P32455 592 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 CCDC13Q8IYE1 715 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 SEPT10Q9P0V9 454 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 RWDD2AQ9UIY3 292 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 RIPOR2Q9Y4F9 1068 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 KAZNQ674X7 775 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-204ENST00000469750 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-204ENST00000469750 CLIC2O15247 247 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 PSMD2Q13200 908 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 ARHGEF6Q15052 776 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 RUNDC3BQ96NL0 473 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
BRAT1-204ENST00000469750 GOLGA8KD6RF30 607 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 ITKQ08881 620 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 RBL2Q08999 1139 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
BRAT1-204ENST00000469750 PARVGQ9HBI0 331 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 EMILIN3Q9NT22 766 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 PLCG1P19174 1290 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 CCNE1P24864 410 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 ENOX1Q8TC92 643 aaKnown RBP17.16■□□□□ 0.34
BRAT1-204ENST00000469750 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 ZBTB24O43167 697 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-204ENST00000469750 PLA2G4BP0C869 781 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 RFX1P22670 979 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 BIRC2Q13490 618 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 TBC1D10BQ4KMP7 808 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-204ENST00000469750 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 H7C0C1 242 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 ATP5OP48047 213 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 NAA35Q5VZE5 725 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-204ENST00000469750 VCX3BQ9H321 246 aa17.16■□□□□ 0.34
BRAT1-204ENST00000469750 IREB2P48200 963 aaKnown RBP17.15■□□□□ 0.34
BRAT1-204ENST00000469750 PPP4R1Q8TF05 950 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 CACTINQ8WUQ7 758 aaKnown RBP17.15■□□□□ 0.34
BRAT1-204ENST00000469750 ZNF653Q96CK0 615 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 AIFM3Q96NN9 605 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 CDC23Q9UJX2 597 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 SYNJ2BP-COX16A0A087WUM0 186 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 ABI1Q8IZP0 508 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 EPSTI1Q96J88 318 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 COX16Q9P0S2 106 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 PSAPP07602 524 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 LMNB2Q03252 620 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 PPP1R2P3Q6NXS1 205 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 SLC35F6Q8N357 371 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 IFT122Q9HBG6 1241 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 SH3GLB2Q9NR46 395 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 PSMD6Q15008 389 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 CAPN12Q6ZSI9 719 aa17.15■□□□□ 0.34
BRAT1-204ENST00000469750 ZWINTO95229 277 aa17.14■□□□□ 0.34
BRAT1-204ENST00000469750 PCK1P35558 622 aa17.14■□□□□ 0.34
BRAT1-204ENST00000469750 SF3A3Q12874 501 aaKnown RBP eCLIP17.14■□□□□ 0.348e-8■■■■□ 20.8
BRAT1-204ENST00000469750 MTERF2Q49AM1 385 aa17.14■□□□□ 0.34
BRAT1-204ENST00000469750 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 ASNSP08243 561 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-204ENST00000469750 THAP9Q9H5L6 903 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-204ENST00000469750 PTPREP23469 700 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 PYCARDQ9ULZ3 195 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 LRRN2O75325 713 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 MAPK4P31152 587 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 GUCY2DQ02846 1103 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 MAP7Q14244 749 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 PFDN6O15212 129 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 RASSF2P50749 326 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
BRAT1-204ENST00000469750 PAGE5Q96GU1 130 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
BRAT1-204ENST00000469750 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 GNGT1P63211 74 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 DCAF4Q8WV16 495 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 GCNT4Q9P109 453 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 KLHL14Q9P2G3 628 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
BRAT1-204ENST00000469750 HOXA13P31271 388 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-204ENST00000469750 RFX6Q8HWS3 928 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 LMNTD2Q8IXW0 634 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 MAGOHBQ96A72 148 aaKnown RBP17.13■□□□□ 0.33
BRAT1-204ENST00000469750 SNX25Q9H3E2 840 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 COL15A1P39059 1388 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 AP3B2Q13367 1082 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 CUL4BQ13620 913 aa17.13■□□□□ 0.33
BRAT1-204ENST00000469750 RPUSD2Q8IZ73 545 aaKnown RBP17.13■□□□□ 0.33
BRAT1-204ENST00000469750 TAB3Q8N5C8 712 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-204ENST00000469750 FAM149B1Q96BN6 582 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms