RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 SH3RF3Q8TEJ3 882 aaPredicted RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 PSPC1Q8WXF1 523 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 GJD4Q96KN9 370 aaPredicted RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 KRIT1O00522 736 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 EBAG9O00559 213 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 TUBB4AP04350 444 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 CDK8P49336 464 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 ATP11AP98196 1134 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 THOC5Q13769 683 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 TBC1D9BQ66K14 1250 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 PI16Q6UXB8 463 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 UHMK1Q8TAS1 419 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 DACT3Q96B18 629 aaPredicted RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 TLR7Q9NYK1 1049 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 HACD3Q9P035 362 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 CDR2Q01850 454 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 NAA35Q5VZE5 725 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 MTIF3Q9H2K0 278 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 DPH5Q9H2P9 285 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 METTL14Q9HCE5 456 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 PLEKHG1Q9ULL1 1385 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 FCER1AP12319 257 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 ATICP31939 592 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 PSMC2P35998 433 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 GUCY2FP51841 1108 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 UBE3CQ15386 1083 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 EFCAB13Q8IY85 973 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 RAB17Q9H0T7 212 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 FEZ2Q9UHY8 353 aaPredicted RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 METP08581 1390 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 MAP3K7O43318 606 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 TSPY1Q01534 308 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 TXNRD1Q16881 649 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 SZRD1Q7Z422 152 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 NDUFAF2Q8N183 169 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 LARP4BQ92615 738 aaKnown RBP7.66□□□□□ -1.18
CD46-212ENST00000469535 CDKL2Q92772 493 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 USP44Q9H0E7 712 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 MYO3BQ8WXR4 1341 aa7.66□□□□□ -1.18
CD46-212ENST00000469535 CASQ2O14958 399 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 ATF2P15336 505 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 SPP2Q13103 211 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 ZNF274Q96GC6 653 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 NR2F2P24468 414 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 NNMTP40261 264 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 TUBB4BP68371 445 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 ACBD5Q5T8D3 534 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 KCTD6Q8NC69 237 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 PPP2R3CQ969Q6 453 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 HINFPQ9BQA5 517 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 HACL1Q9UJ83 578 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 PLXNC1O60486 1568 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 PCP11498 1178 aaKnown RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 CPB1P15086 417 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 GNL1P36915 607 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 BPIFB4P59827 614 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 DCAF4L1Q3SXM0 396 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 MMEL1Q495T6 779 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 CCDC157Q569K6 752 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 CC2D1AQ6P1N0 951 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 ACRBPQ8NEB7 543 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 TCP11Q8WWU5 503 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 VCX3BQ9H321 246 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 FAM8A1Q9UBU6 413 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 TSKSQ9UJT2 592 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 PPFIA4O75335 1185 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 CIAO1O76071 339 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 GAP43P17677 238 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 PDE1BQ01064 536 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 TTLL4Q14679 1199 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 ANKRD20A3Q5VUR7 823 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 FOXP4Q8IVH2 680 aaPredicted RBP7.65□□□□□ -1.18
CD46-212ENST00000469535 FAM186BQ8IYM0 893 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 ANTXR1Q9H6X2 564 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 ABCB11O95342 1321 aa7.65□□□□□ -1.18
CD46-212ENST00000469535 K7ERI5 159 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 TFRCP02786 760 aaKnown RBP7.65□□□□□ -1.19
CD46-212ENST00000469535 GPSM2P81274 684 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 LLGL1Q15334 1064 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 C8orf34Q49A92 452 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 TMEM179Q6ZVK1 233 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 RMDN3Q96TC7 470 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 CALN1Q9BXU9 219 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 KIF28PB7ZC32 967 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 USP17L10C9JJH3 530 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 NFKBIAP25963 317 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 SNX1Q13596 522 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 HP1BP3Q5SSJ5 553 aaPredicted RBP7.65□□□□□ -1.19
CD46-212ENST00000469535 RPGRIP1Q96KN7 1286 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 SEC24BO95487 1268 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 MAPK4P31152 587 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 LONP1P36776 959 aaKnown RBP7.65□□□□□ -1.19
CD46-212ENST00000469535 MTMR1Q13613 665 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 RHPN2Q8IUC4 686 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 BANK1Q8NDB2 785 aa7.65□□□□□ -1.19
CD46-212ENST00000469535 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms