RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 ICAM3P32942 547 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 MCM5P33992 734 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 PSEN2P49810 448 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 PTK7Q13308 1070 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 MFSD10Q14728 455 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 GDF6Q6KF10 455 aaPredicted RBP12.68□□□□□ -0.38
COL4A3-204ENST00000469504 LRRC8DQ7L1W4 858 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 ATXN2LQ8WWM7 1075 aaKnown RBP12.68□□□□□ -0.38
COL4A3-204ENST00000469504 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
COL4A3-204ENST00000469504 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL4A3-204ENST00000469504 PRDM12Q9H4Q4 367 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 SEC63Q9UGP8 760 aaKnown RBP12.68□□□□□ -0.38
COL4A3-204ENST00000469504 YBX2Q9Y2T7 364 aaKnown RBP12.68□□□□□ -0.38
COL4A3-204ENST00000469504 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 RGS20O76081 388 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 GGPS1O95749 300 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 CXCL10P02778 98 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 POU3F3P20264 500 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-204ENST00000469504 UBA1P22314 1058 aaKnown RBP12.67□□□□□ -0.38
COL4A3-204ENST00000469504 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-204ENST00000469504 LIFRP42702 1097 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 KCNJ6P48051 423 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 ANTXR2P58335 489 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 NEDD9Q14511 834 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 KIAA0753Q2KHM9 967 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 TJAP1Q5JTD0 557 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 CUL5Q93034 780 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 SPATA33Q96N06 139 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 INPP4AQ96PE3 977 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-204ENST00000469504 USP26Q9BXU7 913 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-204ENST00000469504 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 HDAC6Q9UBN7 1215 aa12.67□□□□□ -0.38
COL4A3-204ENST00000469504 MYH6P13533 1939 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 KIAA1217Q5T5P2 1943 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 EMSYQ7Z589 1322 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
COL4A3-204ENST00000469504 TANC1Q9C0D5 1861 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 CCDC69A6NI79 296 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 FIBPO43427 364 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 CAND2O75155 1236 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 HSDL1Q3SXM5 330 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 RNF20Q5VTR2 975 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 METTL7BQ6UX53 244 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 FCHSD1Q86WN1 690 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 GIMAP8Q8ND71 665 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-204ENST00000469504 CDHR1Q96JP9 859 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
COL4A3-204ENST00000469504 ABHD14A-ACY1A0A1B0GW23 586 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
COL4A3-204ENST00000469504 PRC1O43663 620 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
COL4A3-204ENST00000469504 GNAT1P11488 350 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 CKBP12277 381 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 RABGGTBP53611 331 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 NLRX1Q86UT6 975 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 HERC6Q8IVU3 1022 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 ESYT1Q9BSJ8 1104 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 C16orf70Q9BSU1 422 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
COL4A3-204ENST00000469504 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 THEGQ9P2T0 379 aa12.65□□□□□ -0.38
COL4A3-204ENST00000469504 SPATA31C2B4DYI2 1134 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 H3BRB1 525 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-204ENST00000469504 CA3P07451 260 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 ZNF286BP0CG31 522 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 IGFBP4P22692 258 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 HOXC8P31273 242 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 SP2Q02086 613 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 BMP2KLQ5H9B9 411 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 SERINC5Q86VE9 423 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 USP38Q8NB14 1042 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 IL31RAQ8NI17 732 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 DHX38Q92620 1227 aaKnown RBP12.64□□□□□ -0.39
COL4A3-204ENST00000469504 TUT1Q9H6E5 874 aaKnown RBP12.64□□□□□ -0.39
COL4A3-204ENST00000469504 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-204ENST00000469504 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
COL4A3-204ENST00000469504 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 C17orf102A2RUQ5 167 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 SLC27A2O14975 620 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 MAFGO15525 162 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 TLL1O43897 1013 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 LGALS2P05162 132 aa12.63□□□□□ -0.39
COL4A3-204ENST00000469504 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
COL4A3-204ENST00000469504 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms