RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GNGT1P63211 74 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 MRPS35P82673 323 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 FANCCQ00597 558 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PSMD2Q13200 908 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 TRIM14Q14142 442 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 GRIK5Q16478 980 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 CAMK4Q16566 473 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PLEKHO1Q53GL0 409 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 GLE1Q53GS7 698 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 LDLRAD1Q5T700 205 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 C1QTNF12Q5T7M4 302 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 ACBD5Q5T8D3 534 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 MIS18BP1Q6P0N0 1132 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 EMBQ6PCB8 327 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 OLFM4Q6UX06 510 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 KDM7AQ6ZMT4 941 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 SYNE3Q6ZMZ3 975 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 NFXL1Q6ZNB6 911 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 CEP57Q86XR8 500 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 CNTROBQ8N137 903 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 MORC4Q8TE76 937 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 EZH1Q92800 747 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 LENG1Q96BZ8 264 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 AGAP3Q96P47 875 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PLEKHG4BQ96PX9 1271 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 TSC22D3Q99576 134 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 NAPGQ99747 312 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 LZTS2Q9BRK4 669 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 XPO4Q9C0E2 1151 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 SAP130Q9H0E3 1048 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 TUT1Q9H6E5 874 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 KIF9Q9HAQ2 790 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 SLC40A1Q9NP59 571 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 LUC7LQ9NQ29 371 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 PAPOLBQ9NRJ5 636 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 DDX20Q9UHI6 824 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 FAM184BQ9ULE4 1060 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 WDR37Q9Y2I8 494 aa5.4□□□□□ -1.54
SF3B1-207ENST00000468925 RRP7AQ9Y3A4 280 aaKnown RBP5.4□□□□□ -1.54
SF3B1-207ENST00000468925 SH3TC1Q8TE82 1336 aa5.4□□□□□ -1.55
SF3B1-207ENST00000468925 ZC3H13Q5T200 1668 aaKnown RBP5.4□□□□□ -1.55
SF3B1-207ENST00000468925 CEMIPQ8WUJ3 1361 aa5.4□□□□□ -1.55
SF3B1-207ENST00000468925 TUBGCP6Q96RT7 1819 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC194A0A1B0GVG4 234 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 HMGB1P1B2RPK0 211 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 B4DLN1 442 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 TMEM232C9JQI7 657 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 PAX4O43316 350 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 HSF2BPO75031 334 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 E2F6O75461 281 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SMNDC1O75940 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 ALX3O95076 343 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 NPTXRO95502 500 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SERPINC1P01008 464 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 IDO1P14902 403 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CCND1P24385 295 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 TNFRSF8P28908 595 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 USP14P54578 494 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 NAP1L1P55209 391 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 GPLD1P80108 840 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 MYL5Q02045 173 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 BLMHQ13867 455 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 TCEAL1Q15170 157 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 IFI16Q16666 785 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SGSM1Q2NKQ1 1148 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 RGL3Q3MIN7 710 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 RRP12Q5JTH9 1297 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 COX20Q5RI15 118 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SPECC1LQ69YQ0 1117 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 PRPF40BQ6NWY9 871 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CAPN12Q6ZSI9 719 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 RUFY3Q7L099 469 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 METTL16Q86W50 562 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 FAM114A1Q8IWE2 563 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CD302Q8IX05 232 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 LMNTD2Q8IXW0 634 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CCDC13Q8IYE1 715 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 FUKQ8N0W3 1084 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 AOPEPQ8N6M6 819 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 EIF1ADQ8N9N8 165 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SLC43A3Q8NBI5 491 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 KCNG4Q8TDN1 519 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 C17orf50Q8WW18 174 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 MRPS27Q92552 414 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CUL5Q93034 780 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 ARMC5Q96C12 935 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 IQCDQ96DY2 449 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 MAML3Q96JK9 1138 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 TRAPPC9Q96Q05 1148 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 CTAGE1Q96RT6 745 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 SDF4Q9BRK5 362 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 VCXQ9H320 206 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 VCX3BQ9H321 246 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 KAT14Q9H8E8 782 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 VCX3AQ9NNX9 186 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 TUBA8Q9NY65 449 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-207ENST00000468925 IFNKQ9P0W0 207 aa5.39□□□□□ -1.55
SF3B1-207ENST00000468925 BLOC1S6Q9UL45 172 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms