RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 NEK9Q8TD19 979 aa11.55□□□□□ -0.56
TRAPPC10-207ENST00000468864 HVCN1Q96D96 273 aa11.55□□□□□ -0.56
TRAPPC10-207ENST00000468864 PSMD1Q99460 953 aa11.55□□□□□ -0.56
TRAPPC10-207ENST00000468864 ZBTB1Q9Y2K1 713 aa11.55□□□□□ -0.56
TRAPPC10-207ENST00000468864 COL4A3BPQ9Y5P4 624 aa11.55□□□□□ -0.56
TRAPPC10-207ENST00000468864 EIF3HO15372 352 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 DDAH1O94760 285 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 GNA14O95837 355 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 LRRC14Q15048 493 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 RBBP5Q15291 538 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 BTG4Q9NY30 223 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 USH1CQ9Y6N9 552 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 WDR91A4D1P6 747 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 RASGRF2O14827 1237 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 USP17L8P0C7I0 530 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 FCER1AP12319 257 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 PLCG2P16885 1265 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 TMOD1P28289 359 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 CARSP49589 748 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 ANTXR2P58335 489 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 CRB1P82279 1406 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 SDCCAG8Q86SQ7 713 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 KIRREL3Q8IZU9 778 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 NT5C3AQ9H0P0 336 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 RNF14Q9UBS8 474 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 INTUQ9ULD6 942 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 NEO1Q92859 1461 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 RASSF2P50749 326 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 ZNF211Q13398 564 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 SPDL1Q96EA4 605 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 CD248Q9HCU0 757 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 PSD3Q9NYI0 1048 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 PARP2Q9UGN5 583 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 SNX12Q9UMY4 172 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 ARHGAP42A6NI28 874 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 OPHN1O60890 802 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 UFL1O94874 794 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 RPS8P62241 208 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 CLUL1Q15846 466 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 KAZNQ674X7 775 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 MIPOL1Q8TD10 442 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 FNBP1Q96RU3 617 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 PSTPIP2Q9H939 334 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 HAUS2Q9NVX0 235 aa11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 LIMA1Q9UHB6 759 aaKnown RBP11.54□□□□□ -0.56
TRAPPC10-207ENST00000468864 PDHA1P08559 390 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ATF7P17544 494 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ERFP50548 548 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 GNPTABQ3T906 1256 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 DCUN1D2Q6PH85 259 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 TXNDC16Q9P2K2 825 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 AMACRQ9UHK6 382 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ABCC12Q96J65 1359 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ABCC3O15438 1527 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 DAPK3O43293 454 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 SERPING1P05155 500 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 TROVE2P10155 538 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 CYP2D6P10635 497 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 PSMC4P43686 418 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 KLK7P49862 253 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 CFAP157Q5JU67 520 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 DDX42Q86XP3 938 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ENAHQ8N8S7 591 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 KIFAP3Q92845 792 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ZMYND12Q9H0C1 365 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 EHD4Q9H223 541 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 DMGDHQ9UI17 866 aaKnown RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ADGRB1O14514 1584 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ARHGEF40Q8TER5 1519 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 IL17RAQ96F46 866 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 RAB3IPQ96QF0 476 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 GOLPH3Q9H4A6 298 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 FBXL5Q9UKA1 691 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 SUFUQ9UMX1 484 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
TRAPPC10-207ENST00000468864 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 POTEMA6NI47 508 aa11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 LSP1P33241 339 aa11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 SLC16A2P36021 539 aa11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 SPATA24Q86W54 205 aa11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 FOXP4Q8IVH2 680 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 PARP9Q8IXQ6 854 aa11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 PIGSQ96S52 555 aa11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 RBM12Q9NTZ6 932 aaKnown RBP11.52□□□□□ -0.56
TRAPPC10-207ENST00000468864 HDAC9Q9UKV0 1011 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms