RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 BARHL2Q9NY43 387 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 PCDHA6Q9UN73 950 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 PCDHA8Q9Y5H6 950 aa14.9□□□□□ -0.02
CLRN1-204ENST00000468836 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 STXBP3O00186 592 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 RGS20O76081 388 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 FOSP01100 380 aaPredicted RBP14.89□□□□□ -0.03
CLRN1-204ENST00000468836 CD4P01730 458 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 SCG2P13521 617 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 ITGB8P26012 769 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
CLRN1-204ENST00000468836 PTPN11Q06124 597 aaPredicted RBP14.89□□□□□ -0.03
CLRN1-204ENST00000468836 TEX2Q8IWB9 1127 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 TRIM22Q8IYM9 498 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 GIMAP8Q8ND71 665 aaPredicted RBP14.89□□□□□ -0.03
CLRN1-204ENST00000468836 SLC26A6Q9BXS9 759 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 AGXT2Q9BYV1 514 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 RIC8AQ9NPQ8 531 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 GRIN2DO15399 1336 aa14.89□□□□□ -0.03
CLRN1-204ENST00000468836 NID2Q14112 1375 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 ZNF286BP0CG31 522 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
CLRN1-204ENST00000468836 ICAM3P32942 547 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 MRPS9P82933 396 aaKnown RBP14.88□□□□□ -0.03
CLRN1-204ENST00000468836 SP4Q02446 784 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 FUT2Q10981 343 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 AP3B2Q13367 1082 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 PFKFB3Q16875 520 aaPredicted RBP14.88□□□□□ -0.03
CLRN1-204ENST00000468836 MYSM1Q5VVJ2 828 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 METTL7BQ6UX53 244 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 CCDC155Q8N6L0 562 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 CCDC148Q8NFR7 591 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 PHKBQ93100 1093 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 GPRASP2Q96D09 838 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 ALG1Q9BT22 464 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 C6orf50Q9HD87 102 aa14.88□□□□□ -0.03
CLRN1-204ENST00000468836 FAM217BQ9NTX9 383 aaPredicted RBP14.88□□□□□ -0.03
CLRN1-204ENST00000468836 TRMT13Q9NUP7 481 aaKnown RBP14.88□□□□□ -0.03
CLRN1-204ENST00000468836 CEP290O15078 2479 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 SPATA31C2B4DYI2 1134 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 PRPF3O43395 683 aaKnown RBP14.87□□□□□ -0.03
CLRN1-204ENST00000468836 PPFIA4O75335 1185 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 CYP2C9P11712 490 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 CSF2RAP15509 400 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 GNA11P29992 359 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 CYP2C18P33260 490 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 ZNF76P36508 570 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 PSEN2P49810 448 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 CCL23P55773 120 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 ANAPC15P60006 121 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 STK3Q13188 491 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 MTMR1Q13613 665 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 TOB2Q14106 344 aaPredicted RBP14.87□□□□□ -0.03
CLRN1-204ENST00000468836 MFSD10Q14728 455 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 SHHQ15465 462 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 HSDL1Q3SXM5 330 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 PSRC1Q6PGN9 363 aaPredicted RBP14.87□□□□□ -0.03
CLRN1-204ENST00000468836 CYFIP1Q7L576 1253 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 RETREG2Q8NC44 543 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 PPP1R13LQ8WUF5 828 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 LRCH3Q96II8 777 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 RNF26Q9BY78 433 aaPredicted RBP14.87□□□□□ -0.03
CLRN1-204ENST00000468836 ANO3Q9BYT9 981 aa14.87□□□□□ -0.03
CLRN1-204ENST00000468836 MTIF3Q9H2K0 278 aaKnown RBP14.87□□□□□ -0.03
CLRN1-204ENST00000468836 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
CLRN1-204ENST00000468836 SOX1O00570 391 aaPredicted RBP14.86□□□□□ -0.03
CLRN1-204ENST00000468836 IFNAR1P17181 557 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 SP2Q02086 613 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 SSRP1Q08945 709 aaKnown RBP14.86□□□□□ -0.03
CLRN1-204ENST00000468836 BFSP2Q13515 415 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 ANKRD1Q15327 319 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 PTGISQ16647 500 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 KIAA0753Q2KHM9 967 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 C9orf50Q5SZB4 431 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 MCTP2Q6DN12 878 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 BICD2Q8TD16 824 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 ZNF274Q96GC6 653 aaPredicted RBP14.86□□□□□ -0.03
CLRN1-204ENST00000468836 PGBD1Q96JS3 809 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 NOC4LQ9BVI4 516 aaKnown RBP14.86□□□□□ -0.03
CLRN1-204ENST00000468836 PKD2L1Q9P0L9 805 aa14.86□□□□□ -0.03
CLRN1-204ENST00000468836 ZNF215Q9UL58 517 aaPredicted RBP14.86□□□□□ -0.03
CLRN1-204ENST00000468836 LTBP2Q14767 1821 aa14.85□□□□□ -0.03
CLRN1-204ENST00000468836 PPFIA3O75145 1194 aa14.85□□□□□ -0.03
CLRN1-204ENST00000468836 CDKL5O76039 1030 aa14.85□□□□□ -0.03
CLRN1-204ENST00000468836 F2P00734 622 aa14.85□□□□□ -0.03
CLRN1-204ENST00000468836 JAKMIP3Q5VZ66 844 aa14.85□□□□□ -0.03
CLRN1-204ENST00000468836 RPUSD2Q8IZ73 545 aaKnown RBP14.85□□□□□ -0.03
CLRN1-204ENST00000468836 REXO1Q8N1G1 1221 aaKnown RBP14.85□□□□□ -0.03
CLRN1-204ENST00000468836 SENP7Q9BQF6 1050 aa14.85□□□□□ -0.03
CLRN1-204ENST00000468836 LARP6Q9BRS8 491 aaKnown RBP14.85□□□□□ -0.03
CLRN1-204ENST00000468836 SLKQ9H2G2 1235 aaPredicted RBP14.85□□□□□ -0.03
CLRN1-204ENST00000468836 ESYT2A0FGR8 921 aa14.84□□□□□ -0.03
CLRN1-204ENST00000468836 MAFGO15525 162 aa14.84□□□□□ -0.03
CLRN1-204ENST00000468836 LGALS2P05162 132 aa14.84□□□□□ -0.03
CLRN1-204ENST00000468836 ACRP10323 421 aa14.84□□□□□ -0.03
CLRN1-204ENST00000468836 EPHB4P54760 987 aa14.84□□□□□ -0.03
CLRN1-204ENST00000468836 EVCP57679 992 aa14.84□□□□□ -0.03
CLRN1-204ENST00000468836 NLRP5P59047 1200 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms