RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 PTPAQ15257 358 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 FBXO46Q6PJ61 603 aaPredicted RBP12.79□□□□□ -0.36
MSH5-214ENST00000468602 FERMT3Q86UX7 667 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 SCFD2Q8WU76 684 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 SLC5A5Q92911 643 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 PGBD1Q96JS3 809 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 KCNH7Q9NS40 1196 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 TBC1D22BQ9NU19 505 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 CFAP45Q9UL16 551 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 CEP131Q9UPN4 1083 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 CNPY2Q9Y2B0 182 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 TRIM17Q9Y577 477 aa12.79□□□□□ -0.36
MSH5-214ENST00000468602 WNT7AO00755 349 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 DHX15O43143 795 aaKnown RBP12.78□□□□□ -0.36
MSH5-214ENST00000468602 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
MSH5-214ENST00000468602 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
MSH5-214ENST00000468602 GRK4P32298 578 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 FOSBP53539 338 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 MTMR1Q13613 665 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 TTLL4Q14679 1199 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 CCL14Q16627 93 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 LETM2Q2VYF4 491 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 DUSP28Q4G0W2 176 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 RAET1EQ8TD07 263 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 HAS1Q92839 578 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 ARMC5Q96C12 935 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
MSH5-214ENST00000468602 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 DDX41Q9UJV9 622 aaKnown RBP12.78□□□□□ -0.36
MSH5-214ENST00000468602 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
MSH5-214ENST00000468602 MSH4O15457 936 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 SEPT4O43236 478 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 SLC26A4O43511 780 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 SLC37A4O43826 429 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 NEMFO60524 1076 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 MSCO60682 206 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 PPP6R2O75170 966 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 PSMD10O75832 226 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 TDP2O95551 362 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 KCNA2P16389 499 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
MSH5-214ENST00000468602 NEDD9Q14511 834 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 PDIA5Q14554 519 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 PRPF38BQ5VTL8 546 aaKnown RBP12.77□□□□□ -0.37
MSH5-214ENST00000468602 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 KCTD17Q8N5Z5 321 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 RDM1Q8NG50 284 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 CYP2W1Q8TAV3 490 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.37
MSH5-214ENST00000468602 AGO4Q9HCK5 861 aaKnown RBP12.77□□□□□ -0.37
MSH5-214ENST00000468602 GNEQ9Y223 722 aaKnown RBP12.77□□□□□ -0.37
MSH5-214ENST00000468602 PTCH2Q9Y6C5 1203 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 TCHHQ07283 1943 aa12.77□□□□□ -0.37
MSH5-214ENST00000468602 ATG7O95352 703 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 ARP10275 920 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
MSH5-214ENST00000468602 ZNF76P36508 570 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 UBXN2AP68543 259 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 KRT85P78386 507 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 CACNB2Q08289 660 aaPredicted RBP12.76□□□□□ -0.37
MSH5-214ENST00000468602 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 PTGDRQ13258 359 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 PPP2R5CQ13362 524 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
MSH5-214ENST00000468602 PRR16Q569H4 304 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 IGSF22Q8N9C0 903 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 ELP1O95163 1332 aa12.76□□□□□ -0.37
MSH5-214ENST00000468602 IPO5O00410 1097 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 DUSP11O75319 330 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 BAG4O95429 457 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 AKR1A1P14550 325 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 CYP2C19P33261 490 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 ZNF746Q6NUN9 644 aaPredicted RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 METTL7BQ6UX53 244 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 FBXO16Q8IX29 292 aaPredicted RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 TRPV1Q8NER1 839 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 KCNG4Q8TDN1 519 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 AK8Q96MA6 479 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 TMEM60Q9H2L4 133 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 PAK6Q9NQU5 681 aaPredicted RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
MSH5-214ENST00000468602 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 HTTP42858 3142 aa12.75□□□□□ -0.37
MSH5-214ENST00000468602 IGKV6D-21A0A0A0MT36 114 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms