RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ZNF792Q3KQV3 632 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MFSD14CQ5VZR4 134 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 GALNT17Q6IS24 598 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 XRRA1Q6P2D8 792 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 RASGRP2Q7LDG7 609 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 NPAS3Q8IXF0 933 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 TRIM22Q8IYM9 498 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 CPXCR1Q8N123 301 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 ANKRD35Q8N283 1001 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 SRBD1Q8N5C6 995 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 CCDC148Q8NFR7 591 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 RAET1EQ8TD07 263 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MORC4Q8TE76 937 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 CLEC4DQ8WXI8 215 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 WASF1Q92558 559 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 HPS1Q92902 700 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 GTF3C6Q969F1 213 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 DDX11Q96FC9 970 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MAML3Q96JK9 1138 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 ZNF333Q96JL9 665 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 AGBL1Q96MI9 1066 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 TCEANC2Q96MN5 208 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 TRERF1Q96PN7 1200 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 IWS1Q96ST2 819 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MMP19Q99542 508 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MPHOSPH6Q99547 160 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 USB1Q9BQ65 265 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MYL10Q9BUA6 226 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 LRRC2Q9BYS8 371 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 ARHGAP39Q9C0H5 1083 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 UBA5Q9GZZ9 404 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 SLKQ9H2G2 1235 aaPredicted RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 BARHL2Q9NY43 387 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 ADD3Q9UEY8 706 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 TPCN1Q9ULQ1 816 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 ISY1Q9ULR0 285 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 LIMCH1Q9UPQ0 1083 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 RIPK3Q9Y572 518 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 LAMA2P24043 3122 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 FRMPD4Q14CM0 1322 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 RPTORQ8N122 1335 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 NFIBO00712 420 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 TERTO14746 1132 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 OPLAHO14841 1288 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 SIAH2O43255 324 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 ADCY3O60266 1144 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 PPP1R11O60927 126 aaPredicted RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 COBLO75128 1261 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 PLEKHA8P1O95397 391 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 DEXIO95424 95 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 FOSP01100 380 aaPredicted RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 ALAS1P13196 640 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 CYBAP13498 195 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 SCG2P13521 617 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 XBP1P17861 261 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 GNA11P29992 359 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 ADD1P35611 737 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 RPS6P62753 249 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 UBXN2AP68543 259 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 NKX3-2P78367 333 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 HMGN5P82970 282 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 AKAP17AQ02040 695 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 SCRN1Q12765 414 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 AP3B2Q13367 1082 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 ME3Q16798 604 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 SLC9C1Q4G0N8 1177 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 MUM1L1Q5H9M0 696 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 COL13A1Q5TAT6 717 aaPredicted RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 CCDC174Q6PII3 467 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 RNF207Q6ZRF8 634 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 DPP9Q86TI2 863 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 DAGLBQ8NCG7 672 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 BICD2Q8TD16 824 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 SYTL5Q8TDW5 730 aaPredicted RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 NSUN6Q8TEA1 469 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 TRIB2Q92519 343 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 SNX21Q969T3 373 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 FGD4Q96M96 766 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 PIGSQ96S52 555 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 TINF2Q9BSI4 451 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 MCOLN1Q9GZU1 580 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 ZMYND12Q9H0C1 365 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 ABHD16BQ9H3Z7 469 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 PSTPIP2Q9H939 334 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 CWC22Q9HCG8 908 aaKnown RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 VTA1Q9NP79 307 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 RIC8AQ9NPQ8 531 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 PAK6Q9NQU5 681 aaPredicted RBP4.05□□□□□ -1.76
TRIM59-202ENST00000468542 MTMR7Q9Y216 660 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 CNPY2Q9Y2B0 182 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 KIF3AQ9Y496 699 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 PTCH2Q9Y6C5 1203 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 MYH7BA7E2Y1 1941 aa4.05□□□□□ -1.76
TRIM59-202ENST00000468542 LAMA3Q16787 3333 aa4.04□□□□□ -1.76
TRIM59-202ENST00000468542 SCN10AQ9Y5Y9 1956 aa4.04□□□□□ -1.76
TRIM59-202ENST00000468542 RBM47A0AV96 593 aaKnown RBP4.04□□□□□ -1.76
TRIM59-202ENST00000468542 GCOM1H8Y6P7 765 aaPredicted RBP4.04□□□□□ -1.76
TRIM59-202ENST00000468542 STXBP3O00186 592 aa4.04□□□□□ -1.76
TRIM59-202ENST00000468542 MEIS2O14770 477 aa4.04□□□□□ -1.76
TRIM59-202ENST00000468542 NKRFO15226 690 aaKnown RBP eCLIP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms