RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
COL4A6-205ENST00000468338 NID2Q14112 1375 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 A0A1W2PPC1 479 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
COL4A6-205ENST00000468338 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
COL4A6-205ENST00000468338 POLR2MP0CAP2 368 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 SYN1P17600 705 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 PSMA5P28066 241 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
COL4A6-205ENST00000468338 BEX3Q00994 111 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 TLE2Q04725 743 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 STXBP2Q15833 593 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
COL4A6-205ENST00000468338 VSIG10LQ86VR7 867 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 GLT1D1Q96MS3 346 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 TM6SF1Q9BZW5 370 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 CNTNAP5Q8WYK1 1306 aa12.87□□□□□ -0.35
COL4A6-205ENST00000468338 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 MEIS2O14770 477 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 CABYRO75952 493 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 RGS20O76081 388 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 ARIH2O95376 493 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 EIF2AK2P19525 551 aaKnown RBP12.86□□□□□ -0.35
COL4A6-205ENST00000468338 CDC27P30260 824 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 RFC5P40937 340 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 MAGEA10P43363 369 aaPredicted RBP12.86□□□□□ -0.35
COL4A6-205ENST00000468338 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 RTN1Q16799 776 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 Q6ZUG5 572 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 PDLIM7Q9NR12 457 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 SEC63Q9UGP8 760 aaKnown RBP12.86□□□□□ -0.35
COL4A6-205ENST00000468338 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
COL4A6-205ENST00000468338 ATP11BQ9Y2G3 1177 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 SCN10AQ9Y5Y9 1956 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 GRIN2DO15399 1336 aa12.86□□□□□ -0.35
COL4A6-205ENST00000468338 LTBP2Q14767 1821 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 TXNP10599 105 aaKnown RBP12.85□□□□□ -0.35
COL4A6-205ENST00000468338 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
COL4A6-205ENST00000468338 PGM5Q15124 567 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 CXCL17Q6UXB2 119 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 IL31RAQ8NI17 732 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL4A6-205ENST00000468338 BRF1Q92994 677 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 EMID1Q96A84 441 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-205ENST00000468338 SEZ6LQ9BYH1 1024 aa12.85□□□□□ -0.35
COL4A6-205ENST00000468338 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-205ENST00000468338 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 ARVCFO00192 962 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 KIAA0355O15063 1070 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 ZEB2O60315 1214 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
COL4A6-205ENST00000468338 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
COL4A6-205ENST00000468338 CPT1AP50416 773 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
COL4A6-205ENST00000468338 APOBRQ0VD83 1088 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 USP17L6PQ6QN14 398 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 SEPT14Q6ZU15 432 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 OR6J1Q8NGC5 347 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 COPS5Q92905 334 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-205ENST00000468338 CCDC97Q96F63 343 aaPredicted RBP12.84□□□□□ -0.35
COL4A6-205ENST00000468338 POM121Q96HA1 1249 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 TBX21Q9UL17 535 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 MROH7Q68CQ1 1323 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
COL4A6-205ENST00000468338 CCDC196A0A1B0GTZ2 297 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 KPNA6O60684 536 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 STAM2O75886 525 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 CD4P01730 458 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 CLTBP09497 229 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 TGFB3P10600 412 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 ITGB8P26012 769 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL4A6-205ENST00000468338 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
COL4A6-205ENST00000468338 FGD1P98174 961 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 ARHGAP1Q07960 439 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
COL4A6-205ENST00000468338 NTRK3Q16288 839 aa12.83□□□□□ -0.36
COL4A6-205ENST00000468338 LY6KQ17RY6 165 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms