RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 GGPS1O95749 300 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 CPA1P15085 419 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 ICAM3P32942 547 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 NAPAP54920 295 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 AKAP17AQ02040 695 aaKnown RBP16.77■□□□□ 0.28
COMMD3-206ENST00000468179 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 SHHQ15465 462 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 GIMAP8Q8ND71 665 aaPredicted RBP16.77■□□□□ 0.28
COMMD3-206ENST00000468179 CDHR1Q96JP9 859 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 INPP4AQ96PE3 977 aaPredicted RBP16.77■□□□□ 0.28
COMMD3-206ENST00000468179 AGXT2Q9BYV1 514 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 TRPV6Q9H1D0 765 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 ZSWIM6Q9HCJ5 1215 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 NOD1Q9Y239 953 aa16.77■□□□□ 0.28
COMMD3-206ENST00000468179 TRIOBPQ9H2D6 2365 aa16.76■□□□□ 0.27
COMMD3-206ENST00000468179 SPATA31C2B4DYI2 1134 aa16.76■□□□□ 0.27
COMMD3-206ENST00000468179 FOSP01100 380 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-206ENST00000468179 FUT2Q10981 343 aa16.76■□□□□ 0.27
COMMD3-206ENST00000468179 MYSM1Q5VVJ2 828 aa16.76■□□□□ 0.27
COMMD3-206ENST00000468179 CCDC12Q8WUD4 166 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-206ENST00000468179 GPKOWQ92917 476 aaPredicted RBP eCLIP16.76■□□□□ 0.27
COMMD3-206ENST00000468179 PPP1R12CQ9BZL4 782 aa16.76■□□□□ 0.27
COMMD3-206ENST00000468179 BAZ2BQ9UIF8 2168 aaKnown RBP16.76■□□□□ 0.27
COMMD3-206ENST00000468179 NOP56O00567 594 aaKnown RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 SOX1O00570 391 aaPredicted RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 UBA1P22314 1058 aaKnown RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 CDC27P30260 824 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 ADCY7P51828 1080 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 CHMP4BP1P59074 171 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 MRPS9P82933 396 aaKnown RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 WWC2Q6AWC2 1192 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 MCTP2Q6DN12 878 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 SESTD1Q86VW0 696 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 RPUSD2Q8IZ73 545 aaKnown RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 LRCH3Q96II8 777 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 RNPC3Q96LT9 517 aaKnown RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 SENP7Q9BQF6 1050 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 MTIF3Q9H2K0 278 aaKnown RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 RIC8AQ9NPQ8 531 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
COMMD3-206ENST00000468179 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 RTEL1Q9NZ71 1219 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 PCDH10Q9P2E7 1040 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 PCDHA6Q9UN73 950 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 PCDHA8Q9Y5H6 950 aa16.75■□□□□ 0.27
COMMD3-206ENST00000468179 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 MAFGO15525 162 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 ADD1P35611 737 aaKnown RBP16.74■□□□□ 0.27
COMMD3-206ENST00000468179 EVCP57679 992 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 C9orf50Q5SZB4 431 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
COMMD3-206ENST00000468179 METTL7BQ6UX53 244 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 CCDC155Q8N6L0 562 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 C7orf31Q8N865 590 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 RETREG2Q8NC44 543 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 GPRASP2Q96D09 838 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
COMMD3-206ENST00000468179 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
COMMD3-206ENST00000468179 NID2Q14112 1375 aa16.74■□□□□ 0.27
COMMD3-206ENST00000468179 HOXD8P13378 290 aaPredicted RBP16.73■□□□□ 0.27
COMMD3-206ENST00000468179 SCG2P13521 617 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 CSF2RAP15509 400 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 CYP2C18P33260 490 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 PSEN2P49810 448 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 SP2Q02086 613 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 BFSP2Q13515 415 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 UBE2SQ16763 222 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
COMMD3-206ENST00000468179 ZFP91Q96JP5 570 aaPredicted RBP16.73■□□□□ 0.27
COMMD3-206ENST00000468179 IL23AQ9NPF7 189 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 LTBP2Q14767 1821 aa16.73■□□□□ 0.27
COMMD3-206ENST00000468179 STXBP3O00186 592 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 F2P00734 622 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 PFKMP08237 780 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 PDIA3P30101 505 aaKnown RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 ANAPC15P60006 121 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 SMAD3P84022 425 aaKnown RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 MFSD10Q14728 455 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 PTGISQ16647 500 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 FAM109BQ6ICB4 259 aaPredicted RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 CPLX2Q6PUV4 134 aaKnown RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 KAT2BQ92831 832 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 ZNF274Q96GC6 653 aaPredicted RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
COMMD3-206ENST00000468179 C6orf50Q9HD87 102 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
COMMD3-206ENST00000468179 CPLX1O14810 134 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 FGBP02675 491 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 CYP2C9P11712 490 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 GNA11P29992 359 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 RFC2P35250 354 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 EPHB4P54760 987 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 CCL23P55773 120 aa16.71■□□□□ 0.27
COMMD3-206ENST00000468179 MTMR1Q13613 665 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms