RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 BLOC1S4Q9NUP1 217 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 CYP39A1Q9NYL5 469 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 GOLGA6L19H0YKK7 550 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 CCDC173Q0VFZ6 552 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 MKRN3Q13064 507 aaKnown RBP23.11■■□□□ 1.29
TMEM53-207ENST00000468117 DHX8Q14562 1220 aaKnown RBP23.11■■□□□ 1.29
TMEM53-207ENST00000468117 TMEM119Q4V9L6 283 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 ARHGEF16Q5VV41 709 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 KCNK18Q7Z418 384 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 C2orf69Q8N8R5 385 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 PDCD2LQ9BRP1 358 aa23.11■■□□□ 1.29
TMEM53-207ENST00000468117 KIAA1217Q5T5P2 1943 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 TRPM7Q96QT4 1865 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 LRCH2Q5VUJ6 765 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 SLC5A5Q92911 643 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 ZNF577Q9BSK1 485 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 WDR11Q9BZH6 1224 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 SPATC1LQ9H0A9 340 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 STK17AQ9UEE5 414 aa23.1■■□□□ 1.29
TMEM53-207ENST00000468117 PSMD10O75832 226 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 MYCLP12524 364 aaPredicted RBP23.09■■□□□ 1.29
TMEM53-207ENST00000468117 LARP4BQ92615 738 aaKnown RBP23.09■■□□□ 1.29
TMEM53-207ENST00000468117 KDM3AQ9Y4C1 1321 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 POTEB3A0JP26 581 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 RPN1P04843 607 aaKnown RBP23.09■■□□□ 1.29
TMEM53-207ENST00000468117 PABPC4Q13310 644 aaKnown RBP eCLIP23.09■■□□□ 1.29
TMEM53-207ENST00000468117 MCM6Q14566 821 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 POTEBQ6S5H4 581 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 RIOX2Q8IUF8 465 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 CHST13Q8NET6 341 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 PPP1R9BQ96SB3 815 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 KCNH7Q9NS40 1196 aa23.09■■□□□ 1.29
TMEM53-207ENST00000468117 MED24O75448 989 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 MYL1P05976 194 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 HYIQ5T013 277 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 OTOP1Q7RTM1 612 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 MLKLQ8NB16 471 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 RAD54LQ92698 747 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 NT5C3AQ9H0P0 336 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 KIAA1024Q9UPX6 916 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 UBIAD1Q9Y5Z9 338 aa23.08■■□□□ 1.29
TMEM53-207ENST00000468117 IPO5O00410 1097 aaKnown RBP23.08■■□□□ 1.28
TMEM53-207ENST00000468117 EML1O00423 815 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 GAS7O60861 476 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 CNMDO75829 334 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 OSBPP22059 807 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 CST9Q5W186 159 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 HAUS3Q68CZ6 603 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 SV2BQ7L1I2 683 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 SMYD4Q8IYR2 804 aaPredicted RBP23.08■■□□□ 1.28
TMEM53-207ENST00000468117 ERMNQ8TAM6 284 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 PDLIM2Q96JY6 352 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 TRIM9Q9C026 710 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 TXNRD2Q9NNW7 524 aa23.08■■□□□ 1.28
TMEM53-207ENST00000468117 CHMP2AO43633 222 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 ADCY5O95622 1261 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 ITGBL1O95965 494 aaPredicted RBP23.07■■□□□ 1.28
TMEM53-207ENST00000468117 BCRP11274 1271 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 NCAPG2Q86XI2 1143 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 CATSPER3Q86XQ3 398 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 MS4A4AQ96JQ5 239 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 PKD2L1Q9P0L9 805 aa23.07■■□□□ 1.28
TMEM53-207ENST00000468117 NCAPHQ15003 741 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 NIPA1Q7RTP0 329 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 ANKRD35Q8N283 1001 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 NSUN6Q8TEA1 469 aaKnown RBP23.06■■□□□ 1.28
TMEM53-207ENST00000468117 MOV10L1Q9BXT6 1211 aaKnown RBP23.06■■□□□ 1.28
TMEM53-207ENST00000468117 JADE2Q9NQC1 790 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 RBPJLQ9UBG7 517 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 POTEFA5A3E0 1075 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 KLRC4O43908 158 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 NR3C2P08235 984 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 AMPD3Q01432 767 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 PPP2R5CQ13362 524 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 MTMR1Q13613 665 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 POTEGQ6S5H5 508 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 C7orf25Q9BPX7 421 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 DACH1Q9UI36 760 aa23.06■■□□□ 1.28
TMEM53-207ENST00000468117 E9PMD0 336 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 SPATA31C1P0DKV0 1188 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 CYP2C8P10632 490 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 RPA1P27694 616 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 CYP4A11Q02928 519 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 CHADLQ6NUI6 762 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 VSIG10LQ86VR7 867 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 R3HDMLQ9H3Y0 253 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 RMND1Q9NWS8 449 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 FBXO40Q9UH90 709 aa23.05■■□□□ 1.28
TMEM53-207ENST00000468117 CCL15-CCL14A0A0B4J2E2 113 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 TESPA1A2RU30 521 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-207ENST00000468117 CETPP11597 493 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 CD44P16070 742 aaKnown RBP23.04■■□□□ 1.28
TMEM53-207ENST00000468117 GTF2A2P52657 109 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 CCL15Q16663 113 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 KMT5BQ4FZB7 885 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 EIF2AK1Q9BQI3 630 aaKnown RBP23.04■■□□□ 1.28
TMEM53-207ENST00000468117 MYMKA6NI61 221 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 SMTNL1A8MU46 457 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 IKBKBO14920 756 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 SLC26A4O43511 780 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms